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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55302.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  49/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
:424 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   197->276 PF01882 * DUF58 6e-13 41.2 %
:HMM:PFM   196->277 PF01882 * DUF58 8.2e-20 34.1 82/86  
:HMM:PFM   21->43 PF08114 * PMP1_2 9.7e-05 39.1 23/43  
:BLT:SWISS 140->285 YEAD_BACSU 5e-08 30.2 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55302.1 GT:GENE BAD55302.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 475507..476781 GB:FROM 475507 GB:TO 476781 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55302.1 LENGTH 424 SQ:AASEQ MRHRDAETTVEAELRWQPAPLVYMLAGCAAVALLAAVVFARWQPMVFAAPLLGVLATAPWQRSPTRIEVDGGGTQRCFETEEVVCTVAAFVESGHALLRITPEPVPGLDVTIEETSDSGAAPAGLRLALSASRWGRYPLSVRVSALSPAGLAVATEILPAGELFVYPVTDPQLMRMPRTELPERLGTHLTRRHGPGVEYADIRAYTPGDQLRTVNWPVSARRGRLYVTERLTNRSADVVVLIDTSLQAPGPASDALELSVRGAAQVVQSTLSAGDRTAVVCLGEQPRWLRPDIGRRQFYRIVDTVLAVGDEHIPTTGTLAPHAAVPLGAIVVAFSTLLDTQFALALIDLRKRGHVVVVVDVLRGTPFRDGLDPTLARMWHLERATMYRDMAAIGVDIVPWPEDVRLDQVMRLLPEHRRSTRVRR GT:EXON 1|1-424:0| BL:SWS:NREP 1 BL:SWS:REP 140->285|YEAD_BACSU|5e-08|30.2|139/398| TM:NTM 3 TM:REGION 18->40| TM:REGION 44->61| TM:REGION 327->348| SEG 25->40|lagcaavallaavvfa| SEG 355->361|vvvvvdv| RP:PFM:NREP 1 RP:PFM:REP 197->276|PF01882|6e-13|41.2|80/86|DUF58| HM:PFM:NREP 2 HM:PFM:REP 196->277|PF01882|8.2e-20|34.1|82/86|DUF58| HM:PFM:REP 21->43|PF08114|9.7e-05|39.1|23/43|PMP1_2| OP:NHOMO 66 OP:NHOMOORG 60 OP:PATTERN ---------------------------1-3--------------------11--111111-------- ----1---------11111-11--1111111111111-11-----11-1-----------111-1-1-1------------------------------------11-----------------------------1--22---3--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-----------1-----------1-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11111-----11----------------------------------------------------------------------- --------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-6, 179-197, 420-424| PSIPRED ccccccccEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccEEEccccEEEccccccccccccEEEEEEEEEEccccEEEEEEEcccccccccEEEEEEccccEEEEEEEEEEccccEEcccEEEEEEccHHEEEEEEEEccccEEEEcccHHHHHHccccccHHHccccccccccccccHHHHccccccccccEEEEEEEEEcccEEEEEEEcccccEEEEEEEcccccccccccHHHHHHHHHHHHHHHHHHcccEEEEEEEcccEEEEcccccHHHHHHHHHHHHHcccccccccHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHcccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHHHHcccEEEEccccccHHHHHHHHccHHHHHHHcc //