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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55305.1
DDBJ      :             putative 3-ketosteroid 1-dehydrogenase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  184/915 : Eukaryota  25/199 : Viruses  0/175   --->[See Alignment]
b.38.5c.3.1d.168.1
:571 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   210->552 1qo8A PDBj 2e-29 33.3 %
:RPS:PDB   9->130 2bs2A PDBj 3e-06 14.3 %
:RPS:PDB   173->559 1e39A PDBj 8e-42 27.0 %
:RPS:SCOP  10->125 1d4cA2  c.3.1.4 * 1e-08 17.2 %
:RPS:SCOP  223->324 2f5tX1  b.38.5.1 * 8e-10 8.1 %
:RPS:SCOP  321->497 1d4cA3  d.168.1.1 * 1e-25 33.1 %
:HMM:SCOP  1->558 1jnrA2 c.3.1.4 * 6.8e-43 28.5 %
:RPS:PFM   94->135 PF00759 * Glyco_hydro_9 4e-06 40.5 %
:RPS:PFM   210->358,436->532 PF00890 * FAD_binding_2 6e-13 37.7 %
:HMM:PFM   12->541 PF00890 * FAD_binding_2 1.2e-95 35.3 408/421  
:BLT:SWISS 11->559 3O1D_COMTE 5e-68 33.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55305.1 GT:GENE BAD55305.1 GT:PRODUCT putative 3-ketosteroid 1-dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(478396..480111) GB:FROM 478396 GB:TO 480111 GB:DIRECTION - GB:PRODUCT putative 3-ketosteroid 1-dehydrogenase GB:PROTEIN_ID BAD55305.1 LENGTH 571 SQ:AASEQ MTDPVLDPHSYDVVVVGSGAAGMTAALTAAHHGLRVVVLEKAAHYGGSTARSGGGVWIPGNKALRASGRPDDREEARTYLHSIIGDVVPKERIDTYIDRGAEAFDFVLDHTPLQMKWVPGYSDYYPEAPGGRGEGRSCEPKPFDLKVLGPEKDKLEPAYAKAPLNVVVMQADFVRLNLIRRHPKGMLRAMRVGARTYWAKFTGKHIVGMGQAIIAAMRKGLMDANVPLLLNTPMTKLVVEDGRVTGVEALHEGEPVVFSARYGVVLGSGGFEHNAEMRAKYQRQPITTEWTTGAAANTGDGIRAGMEIGADVDFMEDAWWGPTIFKGGRPWFALAERNLPGCVIVNAQGKRFANESAPYVEAVHAMYGGEYGQGEGPGENIPAWLVFDQRYRNRYIFAGLQPGQRFPSRWMEDQNIVKADTLAELAELIGVPVGNLTATVERFNKFAETGKDEDFGRGDSHYDRYYGDPTVKPNPCLAALVQGPFYAAKIVPGDLGTKGGLVADESGRVLREDGSPIPGLYASGNCSTPVMGHTYAGPGATIGPAITFGYLSVLDILARKNEQSPAASGTA GT:EXON 1|1-571:0| BL:SWS:NREP 1 BL:SWS:REP 11->559|3O1D_COMTE|5e-68|33.7|528/573| SEG 20->34|aagmtaaltaahhgl| SEG 367->379|yggeygqgegpge| BL:PDB:NREP 1 BL:PDB:REP 210->552|1qo8A|2e-29|33.3|303/564| RP:PDB:NREP 2 RP:PDB:REP 9->130|2bs2A|3e-06|14.3|119/655| RP:PDB:REP 173->559|1e39A|8e-42|27.0|337/568| RP:PFM:NREP 2 RP:PFM:REP 94->135|PF00759|4e-06|40.5|42/432|Glyco_hydro_9| RP:PFM:REP 210->358,436->532|PF00890|6e-13|37.7|206/375|FAD_binding_2| HM:PFM:NREP 1 HM:PFM:REP 12->541|PF00890|1.2e-95|35.3|408/421|FAD_binding_2| GO:PFM:NREP 4 GO:PFM GO:0004553|"GO:hydrolase activity, hydrolyzing O-glycosyl compounds"|PF00759|IPR001701| GO:PFM GO:0005975|"GO:carbohydrate metabolic process"|PF00759|IPR001701| GO:PFM GO:0009055|"GO:electron carrier activity"|PF00890|IPR003953| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF00890|IPR003953| RP:SCP:NREP 3 RP:SCP:REP 10->125|1d4cA2|1e-08|17.2|116/322|c.3.1.4| RP:SCP:REP 223->324|2f5tX1|8e-10|8.1|86/92|b.38.5.1| RP:SCP:REP 321->497|1d4cA3|1e-25|33.1|142/146|d.168.1.1| HM:SCP:REP 1->558|1jnrA2|6.8e-43|28.5|288/357|c.3.1.4|1/1|FAD/NAD(P)-binding domain| OP:NHOMO 563 OP:NHOMOORG 210 OP:PATTERN ------------------------------1------------------------------------- ----1---225---38811-17--5711111587775B99-2-6----1-----2-----328----1-----------8bD1------------------------------------------------------11------1-------------------------------------1-------------------------1-----------1---111111------------------11--12-311214124511-1-21-1-111--------11-------------------------11---1112-86-2------------------24-2------GE-----1-------1---------------511------1---------------2--4--3-1-1-----------13-1-111---1--1-----------------------------------------------46--3543----11-1-------4------1-32232-----3-----4--12-------------------1---1-------------21162-1--21-2-----22------------------1-------1------1-21221-2421133431442---------------22-11-----------------------------233321------------------------------------------------------------------------------------5-11-1-11--3443-----------------------1----------------------------------------------------------------------------- -------------1---1111111---------212------------1---48---1111----------------------------141-------------------------------------------------------------------------------------1--1-1---------1------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 556 STR:RPRED 97.4 SQ:SECSTR ###cccTTcEccEEEEcccHHHHHHHHHHHHHTccEEEEcccccccTTGGGccccEEccccHHHHHTTccccHHHHHHHHHHHTTTcccHHHHHHHHHHHHHHHHHHHHTTccccEEEccTTccccHTTccTTccccHHHHHHTccccGGGcccEEEccccccccccTHHHHccEEEccTTcccccEEEcTTTcEEEcccccccTTccHHHHHHHHHHHHHHHTTcEEEccEEEEEEEETTccEEEEEEEETTTEEEEEEEEEEEEcccccTTcHHHHHHHcGGGTTcccccccTTcccHHHHHHHHTTccEEcTTcEEEEEEEETTTcccccTHHHHHTTcEEEcTTccccccTTccHHHHHHHHHTcGHHHHHHTcTGGcEEEEEEHHHHHHcTHHHHHHHHTcccEEHHTTccEEEccHHHHHHHHTccHHHHHHHHHHHHHHHHTTccTTTcccccccccccEEcGGGccTHTccHHcccEEEEEEEEEEEEEccEEEccTTcEEEcTTccEEEEEEEccTTEEcccTTcccTcTHHHHHHHHHHHHHHHHHHHH############ DISOP:02AL 1-5, 557-571| PSIPRED ccccccccccEEEEEEcccHHHHHHHHHHHHccccEEEEEccccccccEEcccccEEccccHHHHHccccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHHcccccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccHHcccHHHHHHHHHHHHHHcccEEEEccEEEEEEEEccEEEEEEEEEccEEEEEEEEcEEEEEEccccccHHHHHHHcccccccccccccccccHHHHHHHHHHcccEEccccEEEEcEEEccccccccccccccccEEEEcccccEEEcccccHHHHHHHHHHHHHHHccccccccEEEEEEcHHHHHHccccccccccccHHHHHHccEEEEEccHHHHHHHHcccHHHHHHHHHHHHHHHHcccccccccccHHHHHccccccccccccHHHcccccEEEEEEEEcEEEEcccEEEcccEEEEcccccccccHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHcccccccccc //