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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55308.1
DDBJ      :             putative acetaldehyde dehydrogenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  117/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
c.2.1d.81.1
:302 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->300 1nvmB PDBj 1e-57 46.3 %
:RPS:PDB   2->100 3e1kC PDBj 5e-06 12.2 %
:RPS:PDB   165->227 3ctoC PDBj 9e-10 6.6 %
:RPS:SCOP  9->151 1nvmB1  c.2.1.3 * 1e-21 38.5 %
:RPS:SCOP  128->273 1nvmB2  d.81.1.1 * 7e-51 60.0 %
:HMM:SCOP  2->153 1nvmB1 c.2.1.3 * 1.5e-23 32.2 %
:HMM:SCOP  128->274 1nvmB2 d.81.1.1 * 9.4e-67 67.8 %
:RPS:PFM   128->273 PF09290 * AcetDehyd-dimer 1e-47 73.0 %
:HMM:PFM   128->273 PF09290 * AcetDehyd-dimer 9.1e-67 70.8 137/137  
:HMM:PFM   8->114 PF01118 * Semialdhyde_dh 1.2e-14 33.7 104/121  
:BLT:SWISS 1->295 AMNH_PSESP 2e-79 53.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55308.1 GT:GENE BAD55308.1 GT:PRODUCT putative acetaldehyde dehydrogenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 482652..483560 GB:FROM 482652 GB:TO 483560 GB:DIRECTION + GB:PRODUCT putative acetaldehyde dehydrogenase GB:PROTEIN_ID BAD55308.1 LENGTH 302 SQ:AASEQ MSNGTVTAAIVGSGNISTDLLYKLLRSQAIEPRWMIGIDPESEGLKRARGLGLETSHEGVDWLLAQSELPDMIFEATSAYVHRAAAPRYAEAGIRAVDLTPAAVGPAVVPPVNLGANLDAPNVNMITCGGQATIPIVAAVSRVVPVPYAEIVASVSSVSAGPGTRANIDEFTKTTSRGVETIGGAQRGKAIIILNPAEPPMIMRDTIFCAIPEDADTDAIADSIHRMVADIQQYVPGYRLLNEPQFDEPSVVSGGLAKVSVFVEVEGAGDFLPPYAGNLDIMTAAATKVGEVIAGQITSARV GT:EXON 1|1-302:0| BL:SWS:NREP 1 BL:SWS:REP 1->295|AMNH_PSESP|2e-79|53.9|293/316| SEG 101->117|paavgpavvppvnlgan| SEG 152->160|vasvssvsa| BL:PDB:NREP 1 BL:PDB:REP 3->300|1nvmB|1e-57|46.3|296/312| RP:PDB:NREP 2 RP:PDB:REP 2->100|3e1kC|5e-06|12.2|98/393| RP:PDB:REP 165->227|3ctoC|9e-10|6.6|61/86| RP:PFM:NREP 1 RP:PFM:REP 128->273|PF09290|1e-47|73.0|137/137|AcetDehyd-dimer| HM:PFM:NREP 2 HM:PFM:REP 128->273|PF09290|9.1e-67|70.8|137/137|AcetDehyd-dimer| HM:PFM:REP 8->114|PF01118|1.2e-14|33.7|104/121|Semialdhyde_dh| GO:PFM:NREP 3 GO:PFM GO:0008774|"GO:acetaldehyde dehydrogenase (acetylating) activity"|PF09290|IPR015426| GO:PFM GO:0019439|"GO:aromatic compound catabolic process"|PF09290|IPR015426| GO:PFM GO:0055114|"GO:oxidation reduction"|PF09290|IPR015426| RP:SCP:NREP 2 RP:SCP:REP 9->151|1nvmB1|1e-21|38.5|143/157|c.2.1.3| RP:SCP:REP 128->273|1nvmB2|7e-51|60.0|145/155|d.81.1.1| HM:SCP:REP 2->153|1nvmB1|1.5e-23|32.2|152/0|c.2.1.3|1/1|NAD(P)-binding Rossmann-fold domains| HM:SCP:REP 128->274|1nvmB2|9.4e-67|67.8|146/155|d.81.1.1|1/1|Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain| OP:NHOMO 172 OP:NHOMOORG 118 OP:PATTERN -------------------------------------------------------------------- --------------21111-11--2211111232223276---2----------------212-----21------------------------------------------------------------------11111----1-----------------------------------------1---1--------1--1------------1---1----------1-----------------------------------------------------------------------------------------------------------------------------1--1---11--------------------1-----------------------------------1------------1------------------------------------------------------------23--1-------2--1------121111-14241132--11112-1--111-1--------------------35--------------------------------------------------------------------1--------1------1---1----1---------------111-1---11-11-11-11111-111111-1111--------------------1------1-------------------------------1-------------------------41-----------22----------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 300 STR:RPRED 99.3 SQ:SECSTR cccccEEEEEEcccccccHHHHTHHHHHHEEEEEEEcccHHHHHHHHHHTTcTTcEEEccHHHHHHcccccEEEEcccGGGHHHHHHHHHHHGGGcTTccEEEEcccccccHHHHHHHHHHTcEEEEccGGGGcHHHHHHHHHHHTTccccEEEEEEEEEccccHHcHHHHHHHHHHHcccEEEEcccccEEEccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHcHTEEEEcHHHTTEEEccEEEEEEEEETTEEEEEEEEEEEETTcHHHHcccEEEEEEEETHHHHHHHHHHHHcc## DISOP:02AL 1-3| PSIPRED ccccEEEEEEEEccHHHHHHHHHHHccccEEEEEEEEEccccHHHHHHHHccccEEccHHHHHHccccccEEEEEcccccccHHHHHHHHHcccEEEEEcccccccEEEEcccHHHHHccccccEEEEcccHHHHHHHHHHHHccccHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHcccccccEEEEEEcccccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHcccEEEEccEEEcccEEEEccccEEEEEEEEcccccccccccccHHHHHHHHHHHHHHHHHHHHHccc //