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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55313.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  11/68 : Bacteria  387/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
b.45.1
:195 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->169 3cb0D PDBj 2e-15 27.7 %
:RPS:PDB   16->170 2d38A PDBj 2e-41 24.2 %
:RPS:SCOP  14->168 1rz0A  b.45.1.2 * 1e-43 34.7 %
:HMM:SCOP  10->176 1uscA_ b.45.1.2 * 2.4e-54 41.2 %
:RPS:PFM   29->163 PF01613 * Flavin_Reduct 4e-25 45.9 %
:HMM:PFM   23->168 PF01613 * Flavin_Reduct 1.7e-42 38.4 146/155  
:BLT:SWISS 4->165 NTAB_CHEHE 3e-31 42.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55313.1 GT:GENE BAD55313.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(486868..487455) GB:FROM 486868 GB:TO 487455 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD55313.1 LENGTH 195 SQ:AASEQ METNVTADANPVIDPRQFRTVLGQFCTGITVITTFGADAAPVGFACQSFAALSLDPPLVLFCPTKGSRSWAAIERSGRFCVNILAEAQQPVCARFGSREEDKFAGTSWHTSELDLPVLDDALATVECRVDSVIDGGDHYIVIGRVLALSESTDSGRPLLFYRGQYTAIEPEKTTPAPWRADLDHFLTTTTLDTWL GT:EXON 1|1-195:0| BL:SWS:NREP 1 BL:SWS:REP 4->165|NTAB_CHEHE|3e-31|42.1|159/322| SEG 181->193|dldhflttttldt| BL:PDB:NREP 1 BL:PDB:REP 13->169|3cb0D|2e-15|27.7|155/161| RP:PDB:NREP 1 RP:PDB:REP 16->170|2d38A|2e-41|24.2|153/156| RP:PFM:NREP 1 RP:PFM:REP 29->163|PF01613|4e-25|45.9|135/150|Flavin_Reduct| HM:PFM:NREP 1 HM:PFM:REP 23->168|PF01613|1.7e-42|38.4|146/155|Flavin_Reduct| RP:SCP:NREP 1 RP:SCP:REP 14->168|1rz0A|1e-43|34.7|150/153|b.45.1.2| HM:SCP:REP 10->176|1uscA_|2.4e-54|41.2|165/178|b.45.1.2|1/1|FMN-binding split barrel| OP:NHOMO 817 OP:NHOMOORG 406 OP:PATTERN ------111111111--1-----------1-------------------------------------- --1-5--12231--42233-3311433333335444A4KH-4371--1----552112--442-7122461-----------3-------------------------1---------------------------33322---1211--11-1-11-1-11111-----1--1-------1-11-12---3-----------------1--------11311--------------------------------------------------------------------------------------------------------------------------------1------------11-------1--211-111111153212-1-131--11-111112-33-33-2-421-66664433475335221112322222221222222-1111111111111111---1111111111111-----1511-41111345645522224442332222835385211112211112121411111-----1111111----43-----------------------------11---------------------------------1---1--------1------1------------------1---1-1111111112-121211121111222122222211111111111111111111121112222--111111111111-------------1---3111---1-----11-44434151112-11115333235331232-----------------------111----------------111111-------------------------------------1--1-1------ ------------11------------------------------------------------------------------------------------------11-1--2-----------------------------------------------1-----1---------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 180 STR:RPRED 92.3 SQ:SECSTR HHHHHTTTcccccccHHHHHHHTTccEEcEEEEEEEETTEEEEEEEcccEEEETTTTEEEEEEETTTTTTHHHHTccEEEEEEEccHHHHHHHHHcccGGGGGGcccEEEcGGGcEEETTEEEEEEEEEEEEEEETTEEEEEEEEEEEEEcccccccEEEETTEEEEcTTccccccTTTG############### DISOP:02AL 1-6| PSIPRED ccccccccccccccHHHHHHHHHHHcccEEEEEEEcccccEEEEEEEEEEEEEccccEEEEEEcccccHHHHHHHccEEEEEEccHHHHHHHHHHcccccccccccccEEccccccEEcccEEEEEEEEEEEEEcccEEEEEEEEEEEEEcccccccEEEEcccEEEcccccccccccHHHHHHHHHHccccccc //