Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55314.1
DDBJ : putative ring-cleavage dioxygenase
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 57/915 : Eukaryota 0/199 : Viruses 0/175 --->[See Alignment]
d.32.1
:302 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 1->299 2zi8A PDBj e-150 83.9 %
:RPS:PDB 2->295 2ei3A PDBj 2e-33 31.4 %
:RPS:SCOP 1->119 1tsjA d.32.1.7 * 8e-08 9.2 %
:RPS:SCOP 143->293 1mpyA2 d.32.1.3 * 1e-25 19.1 %
:HMM:SCOP 1->120 1lkdA2 d.32.1.3 * 8.2e-21 28.2 %
:HMM:SCOP 132->295 1lkdA2 d.32.1.3 * 1.7e-34 35.9 %
:HMM:PFM 6->116 PF00903 * Glyoxalase 4e-06 20.2 109/128
:HMM:PFM 142->267 PF00903 * Glyoxalase 5.4e-25 31.4 118/128
:BLT:SWISS 1->292 BPHC_BURXL 2e-51 42.0 %
:PROS 245->266|PS00082|EXTRADIOL_DIOXYGENAS
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55314.1
GT:GENE BAD55314.1
GT:PRODUCT putative ring-cleavage dioxygenase
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION complement(487502..488410)
GB:FROM 487502
GB:TO 488410
GB:DIRECTION -
GB:PRODUCT putative ring-cleavage dioxygenase
GB:PROTEIN_ID BAD55314.1
LENGTH 302
SQ:AASEQ MGIRSLGYLRIQATDMAAWREYGLKVLGMVEGKGGDPNSLYLRMDEFPARLVIVPGEADRLLVSGWETANAEELQDIRDRLDRAGVPYKEGTEAEKADRRVYELISFEDPSGNVLEAFHGVALEHRRVVSPYGHRFVTEEQGLGHVVLSTKDDKAALEFYRDVLGFRLRDSMRMPPQMVGRPADGEPAWLRFFGCNPRHHSLAFLPMPTPSGIVHLMIEVENADDVGLCLDRALRRKVKMSATLGRHVNDKMLSFYMKTPGGFDVEFGCEGLEVDDSDWIARESTAVSLWGHDFSVGMREQQ
GT:EXON 1|1-302:0|
BL:SWS:NREP 1
BL:SWS:REP 1->292|BPHC_BURXL|2e-51|42.0|281/298|
PROS 245->266|PS00082|EXTRADIOL_DIOXYGENAS|PDOC00078|
BL:PDB:NREP 1
BL:PDB:REP 1->299|2zi8A|e-150|83.9|299/299|
RP:PDB:NREP 1
RP:PDB:REP 2->295|2ei3A|2e-33|31.4|283/298|
HM:PFM:NREP 2
HM:PFM:REP 6->116|PF00903|4e-06|20.2|109/128|Glyoxalase|
HM:PFM:REP 142->267|PF00903|5.4e-25|31.4|118/128|Glyoxalase|
RP:SCP:NREP 2
RP:SCP:REP 1->119|1tsjA|8e-08|9.2|115/117|d.32.1.7|
RP:SCP:REP 143->293|1mpyA2|1e-25|19.1|141/162|d.32.1.3|
HM:SCP:REP 1->120|1lkdA2|8.2e-21|28.2|117/0|d.32.1.3|1/2|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|
HM:SCP:REP 132->295|1lkdA2|1.7e-34|35.9|156/0|d.32.1.3|2/2|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|
OP:NHOMO 111
OP:NHOMOORG 57
OP:PATTERN -------------------------------------------------------------------- --------------23111-16--2211111165552365------------1-------112----------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------211-----------------------------1-1-1-----------11------------------------------------------------------------39--1-------1-1--------1------1-3111-----1------2------------------------11--------------------------------------------------------------------1--------1------1--------1---------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 299
STR:RPRED 99.0
SQ:SECSTR ccEEEEEEEEEEcccHHHHHHHHHHTTccEEEccccTTEEEEEcccccccEEEEcccccEEEEEEEEEccHHHHHHHHHHHHHTTcccEEccHHHHHHHTEEEEEEEEcTTccEEEEEEEEcTcccccccccccccccGGGcccEEEEccccHHHHHHHHHHTTccccEEEEEccEEEEEEcTTccEEEEEEEccccccccEEEccccccccEEEEEEEEccHHHHHHHHHHHHHTTccEEEEEEEcTTTccEEEEEEcTTccEEEEEEccccccccccccccccccccEEcccccGGG###
DISOP:02AL 298-302|
PSIPRED ccccEEEEEEEEEccHHHHHHHHHHHHccEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEEEccHHHHHHHHHHHHHcccEEEEccccccccccEEEEEEEEcccccEEEEEEccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHHcccEEEEEEEEccccEEEccccccEEEEEEEccccccEEEEEcccccccEEEEEEEEccHHHHHHHHHHHHHcccEEEEcccEEccccEEEEEEEcccccEEEEEEccccccccccccEEccccccccccccccccccc
//
[GTOP]
