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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55314.1
DDBJ      :             putative ring-cleavage dioxygenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  57/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.32.1
:302 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->299 2zi8A PDBj e-150 83.9 %
:RPS:PDB   2->295 2ei3A PDBj 2e-33 31.4 %
:RPS:SCOP  1->119 1tsjA  d.32.1.7 * 8e-08 9.2 %
:RPS:SCOP  143->293 1mpyA2  d.32.1.3 * 1e-25 19.1 %
:HMM:SCOP  1->120 1lkdA2 d.32.1.3 * 8.2e-21 28.2 %
:HMM:SCOP  132->295 1lkdA2 d.32.1.3 * 1.7e-34 35.9 %
:HMM:PFM   6->116 PF00903 * Glyoxalase 4e-06 20.2 109/128  
:HMM:PFM   142->267 PF00903 * Glyoxalase 5.4e-25 31.4 118/128  
:BLT:SWISS 1->292 BPHC_BURXL 2e-51 42.0 %
:PROS 245->266|PS00082|EXTRADIOL_DIOXYGENAS

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55314.1 GT:GENE BAD55314.1 GT:PRODUCT putative ring-cleavage dioxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(487502..488410) GB:FROM 487502 GB:TO 488410 GB:DIRECTION - GB:PRODUCT putative ring-cleavage dioxygenase GB:PROTEIN_ID BAD55314.1 LENGTH 302 SQ:AASEQ MGIRSLGYLRIQATDMAAWREYGLKVLGMVEGKGGDPNSLYLRMDEFPARLVIVPGEADRLLVSGWETANAEELQDIRDRLDRAGVPYKEGTEAEKADRRVYELISFEDPSGNVLEAFHGVALEHRRVVSPYGHRFVTEEQGLGHVVLSTKDDKAALEFYRDVLGFRLRDSMRMPPQMVGRPADGEPAWLRFFGCNPRHHSLAFLPMPTPSGIVHLMIEVENADDVGLCLDRALRRKVKMSATLGRHVNDKMLSFYMKTPGGFDVEFGCEGLEVDDSDWIARESTAVSLWGHDFSVGMREQQ GT:EXON 1|1-302:0| BL:SWS:NREP 1 BL:SWS:REP 1->292|BPHC_BURXL|2e-51|42.0|281/298| PROS 245->266|PS00082|EXTRADIOL_DIOXYGENAS|PDOC00078| BL:PDB:NREP 1 BL:PDB:REP 1->299|2zi8A|e-150|83.9|299/299| RP:PDB:NREP 1 RP:PDB:REP 2->295|2ei3A|2e-33|31.4|283/298| HM:PFM:NREP 2 HM:PFM:REP 6->116|PF00903|4e-06|20.2|109/128|Glyoxalase| HM:PFM:REP 142->267|PF00903|5.4e-25|31.4|118/128|Glyoxalase| RP:SCP:NREP 2 RP:SCP:REP 1->119|1tsjA|8e-08|9.2|115/117|d.32.1.7| RP:SCP:REP 143->293|1mpyA2|1e-25|19.1|141/162|d.32.1.3| HM:SCP:REP 1->120|1lkdA2|8.2e-21|28.2|117/0|d.32.1.3|1/2|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase| HM:SCP:REP 132->295|1lkdA2|1.7e-34|35.9|156/0|d.32.1.3|2/2|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase| OP:NHOMO 111 OP:NHOMOORG 57 OP:PATTERN -------------------------------------------------------------------- --------------23111-16--2211111165552365------------1-------112----------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1---------211-----------------------------1-1-1-----------11------------------------------------------------------------39--1-------1-1--------1------1-3111-----1------2------------------------11--------------------------------------------------------------------1--------1------1--------1---------------------------------------------------------------------------------------------------------------------------------------------------1------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 299 STR:RPRED 99.0 SQ:SECSTR ccEEEEEEEEEEcccHHHHHHHHHHTTccEEEccccTTEEEEEcccccccEEEEcccccEEEEEEEEEccHHHHHHHHHHHHHTTcccEEccHHHHHHHTEEEEEEEEcTTccEEEEEEEEcTcccccccccccccccGGGcccEEEEccccHHHHHHHHHHTTccccEEEEEccEEEEEEcTTccEEEEEEEccccccccEEEccccccccEEEEEEEEccHHHHHHHHHHHHHTTccEEEEEEEcTTTccEEEEEEcTTccEEEEEEccccccccccccccccccccEEcccccGGG### DISOP:02AL 298-302| PSIPRED ccccEEEEEEEEEccHHHHHHHHHHHHccEEEEcccccEEEEEEcccccEEEEEEcccccEEEEEEEEccHHHHHHHHHHHHHcccEEEEccccccccccEEEEEEEEcccccEEEEEEccccccccccccccccccccccEEEEEEEEcccHHHHHHHHHHHcccEEEEEEEEccccEEEccccccEEEEEEEccccccEEEEEcccccccEEEEEEEEccHHHHHHHHHHHHHcccEEEEcccEEccccEEEEEEEcccccEEEEEEccccccccccccEEccccccccccccccccccc //