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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55315.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  388/915 : Eukaryota  99/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:293 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   7->288 2vf2A PDBj e-115 70.1 %
:RPS:PDB   22->287 3e3aB PDBj 8e-38 18.7 %
:RPS:SCOP  22->286 1c4xA  c.69.1.10 * 1e-55 32.3 %
:HMM:SCOP  4->287 1ehyA_ c.69.1.11 * 1.8e-63 33.7 %
:RPS:PFM   66->268 PF00561 * Abhydrolase_1 1e-15 35.5 %
:HMM:PFM   64->283 PF00561 * Abhydrolase_1 4.8e-30 27.2 217/231  
:HMM:PFM   23->96 PF12146 * Hydrolase_4 1e-08 25.0 72/79  
:BLT:SWISS 7->286 BPHD_PSEPU 2e-62 44.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55315.1 GT:GENE BAD55315.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(488413..489294) GB:FROM 488413 GB:TO 489294 GB:DIRECTION - GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD55315.1 LENGTH 293 SQ:AASEQ MTSTAELTYESTSRYAQVRPDLKLHYHEAGVGNGPTIVLLHGGGPGASSWSNFARNIPVLAQNFHVLAVDQPGFGRSDKPVDHPQYFSHSAAALKDLLDTLGVTERVHLLGNSLGGGAAVRFALDYPDRAGKLVLMGPGGLSMNAYAPDPTEGVKLLSRFNFEPTRQNLEAFLRIMVFDQKLITDELIDERFASAATPEALAATRAMGKSFAGPDFELGMLWRDAYKLRQPVLLIWGREDRVNPLDGAIVATKMIPRVQLHVFGGCGHWAQLEKFDEFNRLATDFLSGPGKES GT:EXON 1|1-293:0| BL:SWS:NREP 1 BL:SWS:REP 7->286|BPHD_PSEPU|2e-62|44.4|275/286| SEG 193->206|asaatpealaatra| BL:PDB:NREP 1 BL:PDB:REP 7->288|2vf2A|e-115|70.1|281/284| RP:PDB:NREP 1 RP:PDB:REP 22->287|3e3aB|8e-38|18.7|257/275| RP:PFM:NREP 1 RP:PFM:REP 66->268|PF00561|1e-15|35.5|183/211|Abhydrolase_1| HM:PFM:NREP 2 HM:PFM:REP 64->283|PF00561|4.8e-30|27.2|217/231|Abhydrolase_1| HM:PFM:REP 23->96|PF12146|1e-08|25.0|72/79|Hydrolase_4| RP:SCP:NREP 1 RP:SCP:REP 22->286|1c4xA|1e-55|32.3|260/281|c.69.1.10| HM:SCP:REP 4->287|1ehyA_|1.8e-63|33.7|276/293|c.69.1.11|1/1|alpha/beta-Hydrolases| OP:NHOMO 1147 OP:NHOMOORG 499 OP:PATTERN ---------------1-------13--1----------------1-----1-1-------11-1--11 2-1-2--1111---6A733-38--64333333C9AA29FC-33611----1-1--1----325-1-44--2---------113-------------1--21312173124--------------113-3-2221324444411133455223222111--1--21-26273--1-1---1---2---1----1-3333324323232212111113421-1----------3---------------------------------------------------------------------------------------------1-2-----1-1-1-----------1-1--1-22-----11---2----1-1-221-----45655--111213111111---1--34441514--313---112-312-3313121111111-411111111111---3-------------------------------2491-375133666432111-444611111277A3523-144-2211--24-11-21--21-1-----------3615111-----------3--1-221322433-----------------------------11114--321111111-311111111-111----11--------------111-1---11-11111-11111-111-11-1111111---1-------------1------------------------1----------352----------------1222212-116-3333-223433531221-------------1------1---3111211111------1-11----------------------------------------2-----1----1- -----------------22--2-------1111--------11111-114113111---111----1-----1--11111----------1------------121----865345-11-221-33-323F2-2371-1111142-1-112-1311--321---41--3264322--1-9---1142172241-1-14- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 291 STR:RPRED 99.3 SQ:SECSTR cccccGGccccEEEEEccETTcEEEEEEEccTccEEEEEEccTTccGGGGTTTHHGHHHHHTTEEEEEEccTTcGGGTTcccccccHHHHHHHHHHHHHHTTccccEEEEEETHHHHHHHHHHHHcGGGEEEEEEEcccccccHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHccHHHHTcHHHHHHHHHHHHHccccccHHHHHHTTcccccccGGGGGGHTTccccEEEEEETTcccccHHHHHHHHHHcTTEEEEEETTccTTHHHHcHHHHHHHHHHHHHGccc## DISOP:02AL 1-2, 4-7, 290-293| PSIPRED ccccccccccccccEEEEccccEEEEEEEccccccEEEEEEcccccHHHHHHHHHHHHHHHcccEEEEEEccccccccccccccccHHHHHHHHHHHHHHccccccEEEEEEcHHHHHHHHHHHHcHHHHcEEEEEcccccccccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccHHHHHHHHHHHHcccccHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHccccEEEEEcccccccHHccHHHHHHHHHHHHHcccccc //