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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55319.1
DDBJ      :             putative transporter
Swiss-Prot:             

Homologs  Archaea  2/68 : Bacteria  93/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:413 amino acids
:PSIPRED
:DISOPRED
:RPS:SCOP  44->297 1pv6A  f.38.1.2 * 6e-09 15.5 %
:HMM:SCOP  1->393 1pw4A_ f.38.1.1 * 1.6e-59 28.2 %
:RPS:PFM   37->296 PF07690 * MFS_1 8e-06 30.0 %
:HMM:PFM   25->353 PF07690 * MFS_1 4.2e-42 29.2 329/353  
:BLT:SWISS 17->365 YFMO_BACSU 3e-99 52.1 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55319.1 GT:GENE BAD55319.1 GT:PRODUCT putative transporter GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(492360..493601) GB:FROM 492360 GB:TO 493601 GB:DIRECTION - GB:PRODUCT putative transporter GB:PROTEIN_ID BAD55319.1 LENGTH 413 SQ:AASEQ MSTATHARPSAPASTRQPKAVWAVAFASVIAFMGIGLVDPILKPIGEQLHASPSQVSLLFTSYMAVTGIAMLVTGVVSSRFGAKKTLLAGLAIIVVFSALAGMSDSIGQIVGFRAGWGLGNALFIATALATIVGAASGGVAKAIILYEAALGIGIAAGPLLGGVLGDISWRGPFFGVAALMAIAFVAIVALLPELPKPAQPTSLAAPFRALRHRGLLIVSITALLYNFGFFTLLAYTPFPLDMGSYAIGFIFFGWGVLLAITSVFAAPRLQRRFGTLPMIATVLGLFALDLAVMAMFAEHKPVLIVGVVLAGAFLGVNNTLITEAVMISAPVERSTASAAYSFVRFAGGAVAPWLAGKLGEHMVALPFWVGAACTAAAVAVLLLGRNALAHIDDHDPAPHSITEAQAITLGDD GT:EXON 1|1-413:0| BL:SWS:NREP 1 BL:SWS:REP 17->365|YFMO_BACSU|3e-99|52.1|349/396| TM:NTM 10 TM:REGION 22->44| TM:REGION 69->91| TM:REGION 120->142| TM:REGION 147->169| TM:REGION 176->198| TM:REGION 216->238| TM:REGION 247->269| TM:REGION 275->297| TM:REGION 306->328| TM:REGION 366->388| SEG 143->166|aiilyeaalgigiaagpllggvlg| SEG 303->317|vlivgvvlagaflgv| SEG 370->390|vgaactaaavavlllgrnala| RP:PFM:NREP 1 RP:PFM:REP 37->296|PF07690|8e-06|30.0|243/347|MFS_1| HM:PFM:NREP 1 HM:PFM:REP 25->353|PF07690|4.2e-42|29.2|329/353|MFS_1| GO:PFM:NREP 1 GO:PFM GO:0055085|"GO:transmembrane transport"|PF07690|IPR011701| RP:SCP:NREP 1 RP:SCP:REP 44->297|1pv6A|6e-09|15.5|251/417|f.38.1.2| HM:SCP:REP 1->393|1pw4A_|1.6e-59|28.2|390/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 107 OP:NHOMOORG 96 OP:PATTERN -------------------------11----------------------------------------- ----2-----------1----1---2------11112111111-111--11-111--1----112-1221------------------------------------------------------------------------------------------------------------------11-----1-1111111111111111--1111111-11--1-111111-2-------------------------------------2---------------------------------------------------------------------------------------------------------------------------1---------------------------1------------------1----------------------1--------------------------------1--------12221-------------------------1----11----------------------------1------------1----------11-11--------------------------------------------------------------------------1------------------------------------1----------11----------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1- -----------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-18, 195-208, 412-413| PSIPRED ccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHccccc //