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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55335.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  20/915 : Eukaryota  4/199 : Viruses  1/175   --->[See Alignment]
c.108.1
:222 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   88->213 2hoqA PDBj 4e-08 33.6 %
:RPS:PDB   78->211 2cfsA PDBj 2e-15 19.4 %
:RPS:SCOP  3->212 1x42A1  c.108.1.1 * 8e-19 23.2 %
:HMM:SCOP  1->209 1zs9A1 c.108.1.22 * 3.7e-34 32.5 %
:RPS:PFM   80->169 PF00702 * Hydrolase 1e-04 35.2 %
:HMM:PFM   3->172 PF00702 * Hydrolase 8.1e-12 26.1 165/192  
:BLT:SWISS 84->212 Y1437_METJA 2e-12 37.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55335.1 GT:GENE BAD55335.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 507019..507687 GB:FROM 507019 GB:TO 507687 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD55335.1 LENGTH 222 SQ:AASEQ MVIEAVVFDVGETLVDETREYGSWADWLGVPRHTFVAVLGATIARGLDYRETFQVFRPGFDLTAEREARAAAGRPEWFGEDDLYADVRPALAELGAAGIWVGVVGNQTARAGELLRGLDLPCDFIATSDEWGVSKPDTAFFHRIIEEADRPADVILYVGDRLDNDIAPAKGVGMRTAFIQRGPWGWVHRDSPSVAELADFRIDFLTELPGLVATGADMLDSH GT:EXON 1|1-222:0| BL:SWS:NREP 1 BL:SWS:REP 84->212|Y1437_METJA|2e-12|37.1|124/228| SEG 64->72|aerearaaa| BL:PDB:NREP 1 BL:PDB:REP 88->213|2hoqA|4e-08|33.6|122/237| RP:PDB:NREP 1 RP:PDB:REP 78->211|2cfsA|2e-15|19.4|134/291| RP:PFM:NREP 1 RP:PFM:REP 80->169|PF00702|1e-04|35.2|88/195|Hydrolase| HM:PFM:NREP 1 HM:PFM:REP 3->172|PF00702|8.1e-12|26.1|165/192|Hydrolase| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00702|IPR005834| GO:PFM GO:0008152|"GO:metabolic process"|PF00702|IPR005834| RP:SCP:NREP 1 RP:SCP:REP 3->212|1x42A1|8e-19|23.2|203/230|c.108.1.1| HM:SCP:REP 1->209|1zs9A1|3.7e-34|32.5|203/0|c.108.1.22|1/1|HAD-like| OP:NHOMO 35 OP:NHOMOORG 33 OP:PATTERN -----------------------------------11111111------------------------- ----1-------------------------------1------1----------------12--1----21-----------------------------------------------------------------------------------------------------------------------------------------------------------------1---------------------------------------------------111---------------------------11---111-------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1------1------------------------------------------------------------------------------------------------------------ ---------------------------------------------------------------------------------------------------------------1-111----------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------- STR:NPRED 213 STR:RPRED 95.9 SQ:SECSTR ccccEEEEcccTTTccHHHHTTccccHHHHHHHHHHHHHHHHHHTTccHHHHHHHHHHHTTccccHHHHHHHHHHHHccTTccHHHHHHHHHHHTcTTcEEEEcccccEEEcTTccHHHHHHHHHHTcccEEccTTcTHHHHHHTTcccccGGGEEEEEccTTTHHHHHHHTTcEEEEETTccccHHHHHTTcGGGcccEEEccGGGGGGGHc######### DISOP:02AL 219-222| PSIPRED ccEEEEEEEccccccccHHHHHHHHHHHHcHHHHHHHHHHHHHHccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHcccEEEEEEcccHHHHHHHHHccccccEEEEEcccccccccHHHHHHHHHHHcccHHHEEEEcccHHHHHHHHHHcccEEEEEEcccccccccccccHHccccEEEccHHHHHHHHHccccccccc //