[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55352.1
DDBJ      :             putative dioxygenase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  378/915 : Eukaryota  86/199 : Viruses  0/175   --->[See Alignment]
c.1.4c.1.5
:365 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   8->342 3bo9A PDBj 9e-32 41.1 %
:RPS:PDB   8->342 3bo9A PDBj 8e-38 35.1 %
:RPS:SCOP  103->248 1al7A  c.1.4.1 * 3e-09 13.8 %
:HMM:SCOP  8->362 1pvnA1 c.1.5.1 * 1.4e-57 33.2 %
:RPS:PFM   11->341 PF03060 * NPD 2e-37 41.8 %
:HMM:PFM   9->344 PF03060 * NPD 3.9e-100 46.3 298/323  
:BLT:SWISS 9->247 2NPD_STAAS 4e-29 31.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55352.1 GT:GENE BAD55352.1 GT:PRODUCT putative dioxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(522420..523517) GB:FROM 522420 GB:TO 523517 GB:DIRECTION - GB:PRODUCT putative dioxygenase GB:PROTEIN_ID BAD55352.1 LENGTH 365 SQ:AASEQ MNAPTPRLRTALTDLVGIEHPVVQTGMGWVAGPSLVSATANAGGLGILASATMTYEELEAAIAKTKAQTDRSFGVNIRADASDANERIDLLIRERVKVASFALAPKKDLIAKLKDAGVVVIPSIGAAKHAVKVASWGADAVIVQGGEGGGHTGPVATTLLLPSVLDAVDIPVVAAGGFFDGRGLAAALAYGAAGVAMGTRFLLTQDSSVPDAVKQEYLNRHLQDTVVSLKVDGMPHRVLNTELVQRLEHSGRWRGFAAAVSNAARFKSMTGMKWSTIVKDGLAMRKTKDLTWSQVIMAANTPMLLRAGLVEGNTQAGVLAAGQVTGIIDDLPTCKELIERIVTEAEERLDALASLRASAQPDASG GT:EXON 1|1-365:0| BL:SWS:NREP 1 BL:SWS:REP 9->247|2NPD_STAAS|4e-29|31.8|239/355| SEG 181->198|grglaaalaygaagvamg| SEG 344->359|eaeerldalaslrasa| BL:PDB:NREP 1 BL:PDB:REP 8->342|3bo9A|9e-32|41.1|285/302| RP:PDB:NREP 1 RP:PDB:REP 8->342|3bo9A|8e-38|35.1|285/302| RP:PFM:NREP 1 RP:PFM:REP 11->341|PF03060|2e-37|41.8|292/312|NPD| HM:PFM:NREP 1 HM:PFM:REP 9->344|PF03060|3.9e-100|46.3|298/323|NPD| GO:PFM:NREP 2 GO:PFM GO:0018580|"GO:2-nitropropane dioxygenase activity"|PF03060|IPR004136| GO:PFM GO:0055114|"GO:oxidation reduction"|PF03060|IPR004136| RP:SCP:NREP 1 RP:SCP:REP 103->248|1al7A|3e-09|13.8|145/350|c.1.4.1| HM:SCP:REP 8->362|1pvnA1|1.4e-57|33.2|301/0|c.1.5.1|1/1|Inosine monophosphate dehydrogenase (IMPDH)| OP:NHOMO 817 OP:NHOMOORG 465 OP:PATTERN -----------------------1-------------------------------------------- ----31--------31233-35--2732333154443588-1------------1-----224-11-3111--------113------11211111---11111231--1------------------------------------------------------1---------------------1111--11111111111111111-31111111133211-22222221-111111111111111--211---11-1---11--11-1-11111-11121111211111111111111111111211111111111111-21112222222122-1221111-2---111222211121211111-121---4334-------5-211-2-21--------------1---1----5-----1---11--11-4--2--------22222222111112211111111111---------------1111-33541-1-15---231-----22311---1-5-12443-------123211111-1-----1--------------18121--1--1---1---------11111-------------------------------1--3---111--1----1------1------------------------------------------------------121----------1--11-------------------------------------1111-1-1-1112-------1---111-1-11--1111111---1---1-222----------------------------------------1-111111----------1-------------------------1111211111-1- --------31--11345544353536544333333333132333333333333333333333------------------1--------4725333111-112222--1---------------------------------------------------------------------16111-1113132111--1-- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 341 STR:RPRED 93.4 SQ:SECSTR #cGccEEcccHHHHHHTccccEEcccTTTTccHHHHHHHHHTTccEEEEcTTTcHHHHHHHHHHHHTTccccEEEEEETTcTTHHHHHHHHHHTTccEEEEEccccHHHHHHHHHTTcEEEEEEcccHHHHHHHHTTcccEEEEEcTccEEcccccHHHHHHHHHHHccccEEEEcccccHHHHHHHHHHHTccEEEcHHHHTcccccccHHHHHHHHHccTTcEEEEcTTTTccEEEEccHHHHHHHGHHHHHHHHHHHHHHHTcccGGGHHHHccEGccccTTHHHHHHHHHcHHHHHHTTHHHHHHTTccTTTccccccGGGGGccccccHHHHHHHHH####################### DISOP:02AL 1-3, 356-365| PSIPRED ccccccccccHHHHHHcccccEEEccccccccHHHHHHHHHcccEEEEccccccHHHHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHccccEEEEEccccHHHHHHHHHcccEEEEEEccHHHHHHHHHHcccEEEEEccccccccccccHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHccccEEEHHHHHHHHHcccccHHHHHHHHccccccEEEEEEccccEEEcccHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHccccccccc //