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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55369.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  27/68 : Bacteria  50/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.1.16
:346 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   55->346 1ezwA PDBj 6e-17 28.4 %
:RPS:PDB   42->334 3b9nB PDBj 2e-30 10.2 %
:RPS:SCOP  43->339 1ezwA  c.1.16.3 * 5e-33 24.1 %
:HMM:SCOP  2->347 1f07A_ c.1.16.3 * 4.2e-67 34.8 %
:RPS:PFM   55->235 PF00296 * Bac_luciferase 5e-16 39.4 %
:HMM:PFM   14->325 PF00296 * Bac_luciferase 3.5e-71 33.7 273/307  
:BLT:SWISS 54->332 MER_ARCFU 1e-21 31.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55369.1 GT:GENE BAD55369.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 539399..540439 GB:FROM 539399 GB:TO 540439 GB:DIRECTION + GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD55369.1 LENGTH 346 SQ:AASEQ MMKFGLQLGYWMAQPPANAGELVVAAEAAGFDAVFAAESWGSDAFGPLMWWGSRTERVRLGTSVVQLSARTPAATAMHALTLDHLSGGRAVLGLGVSGPQVVEGWYGQPFAKPLQRTREYVEIIRKVLAREAPVTSDGPHYPLPYTGPGATGLGKPLKPIVHPLRADLPIWLGAEGPKNVALTAEIADGWLAIYFAPRLADMYHGWLDEGFARPGARRTREDFEIAASCQVVITDDPAAELERMRWIMALYIGGMGAPELNFHAQVYRRMGYDREVDEIGALFQAGKKAEAAAAVPDELILDTAIIGDENHVREQLKVWEAAGVTMMLVSVPDVEQLHRLAPLVEQ GT:EXON 1|1-346:0| BL:SWS:NREP 1 BL:SWS:REP 54->332|MER_ARCFU|1e-21|31.5|260/332| SEG 17->38|anagelvvaaeaagfdavfaae| SEG 285->294|agkkaeaaaa| BL:PDB:NREP 1 BL:PDB:REP 55->346|1ezwA|6e-17|28.4|271/347| RP:PDB:NREP 1 RP:PDB:REP 42->334|3b9nB|2e-30|10.2|285/434| RP:PFM:NREP 1 RP:PFM:REP 55->235|PF00296|5e-16|39.4|165/296|Bac_luciferase| HM:PFM:NREP 1 HM:PFM:REP 14->325|PF00296|3.5e-71|33.7|273/307|Bac_luciferase| RP:SCP:NREP 1 RP:SCP:REP 43->339|1ezwA|5e-33|24.1|278/347|c.1.16.3| HM:SCP:REP 2->347|1f07A_|4.2e-67|34.8|316/0|c.1.16.3|1/1|Bacterial luciferase-like| OP:NHOMO 239 OP:NHOMOORG 77 OP:PATTERN -----------------------32111--1211111-111111111111---1------------12 ---17---------58733-3B116833333478883475-91934--1-----------227-5234252-----------1-----------------------------------------------------122-1----3-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------2------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 308 STR:RPRED 89.0 SQ:SECSTR ######################################TcccccGGGHHHHHHHccccEEEEEEEccccccHHHHHHHHHHHHHHTTccEEEEEEccccHHHHHHTTccHHHHHHHHHHHHHHHHHHHHTcccTTcEEEETTTTEEEcGGGcEEcccccccccTTcccEEEEccccHHHHHHHHHHccEEEcccccHHHHHHHHHHHHHHTGGGTHHccGGGcEEEEEEEEEEcccHHHHHHHHHHHHTTccHHHHHHHHHHHHcccTTcccccHHcTTcccccccHHHHHHHHTcGGGcccEEEEEcHHHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHT PSIPRED cccEEEEccccccccHHHHHHHHHHHHHccccEEEEcccccccHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHHHHHHHccccEEEEEEccccHHHHHHcccccccHHHHHHHHHHHHHHHHcccccccccccEEEcccccccccccccccccccccccccccEEEEcccHHHHHHHHHHccEEEEccccHHHHHHHHHHHHHHHHHcccccccccEEEEEEEEEEEEccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccHHHHHHHHHHcccHHHHHHHcccHHHHHHccEEccHHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHcc //