Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55372.1
DDBJ : hypothetical protein
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 97/915 : Eukaryota 3/199 : Viruses 0/175 --->[See Alignment]
d.32.1
:139 amino acids
:SECSTR
:PSIPRED
:RPS:PDB 4->132 3e5dA PDBj 2e-08 15.6 %
:RPS:SCOP 4->129 1sp9A d.32.1.3 * 4e-09 7.3 %
:HMM:SCOP 1->134 1tsjA_ d.32.1.7 * 1.2e-20 31.5 %
:HMM:PFM 8->129 PF00903 * Glyoxalase 1.3e-06 22.6 115/128
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55372.1
GT:GENE BAD55372.1
GT:PRODUCT hypothetical protein
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION 543234..543653
GB:FROM 543234
GB:TO 543653
GB:DIRECTION +
GB:PRODUCT hypothetical protein
GB:PROTEIN_ID BAD55372.1
LENGTH 139
SQ:AASEQ MSSKMIFINLPVRELSRSKDFYQALGWKLNEDFTDDNAACIVVDDNICLMLLTRQYFQTFTKRPVAETTGATGAAYALSLGSAAEVDALTEAALAAGGSEEVNEDKRAQEAEVGMHGRTFLDPDGHQWEPFWMDYPGGA
GT:EXON 1|1-139:0|
SEG 66->85|aettgatgaayalslgsaae|
RP:PDB:NREP 1
RP:PDB:REP 4->132|3e5dA|2e-08|15.6|122/122|
HM:PFM:NREP 1
HM:PFM:REP 8->129|PF00903|1.3e-06|22.6|115/128|Glyoxalase|
RP:SCP:NREP 1
RP:SCP:REP 4->129|1sp9A|4e-09|7.3|123/362|d.32.1.3|
HM:SCP:REP 1->134|1tsjA_|1.2e-20|31.5|127/0|d.32.1.7|1/1|Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase|
OP:NHOMO 108
OP:NHOMOORG 100
OP:PATTERN -------------------------------------------------------------------- --------111---1---------------------1221---1-----11-111-1---------11111-------------------------1----2----21-1----------------------------------1------------------------1----------------------------------------1--1-----------11111131--------------------1----------------------111----------------------------------------------------------------------------------------------1-----1-------2---------1----------1----------1---11---111-11--------1111----------------------------------------------------2--1111111111-----1111------1-1111------11----11-1---------------------1-1-------------------------1-11------------------------------------------------1111----1----------------------------------------------------------------------------1-----------------------------------------------------------------1-----------------------------------------11----------------------------------------------------------------------- ------------------------------------------------11------------------------------------------------------------------------------------------------------------------------------------------------1---- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 139
STR:RPRED 100.0
SQ:SECSTR ccccccEEEEEcccHHHHHHHHHHHccEEcccEEEGGGTEEEEETcEEcccccEEEEEETTccccccccccccccEEEEcccHHHHHHHHHHHHHTTccEEEEEEcTTEEETTccEEEEEEcTTccEEEEEcEcTTcEE
PSIPRED cccEEEEEEEccccHHHHHHHHHHHccEEccccccccEEEEEEcccEEEEEEcHHHHHHHccccccccccccEEEEEEEcccHHHHHHHHHHHHHcccEEcccccccccccccccEEEEEEcccccEEEEEEEcccccc
//
[GTOP]
