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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55375.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  14/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.38.1
:281 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   26->259 3cjyA PDBj 1e-09 18.1 %
:RPS:SCOP  101->133 2hboA1  d.38.1.5 * 1e-04 21.2 %
:HMM:SCOP  5->125 1zkiA1 d.38.1.5 * 9e-08 22.3 %
:HMM:PFM   24->54 PF12492 * DUF3705 2.7e-16 41.9 31/31  
:HMM:PFM   73->114 PF03061 * 4HBT 0.0006 26.2 42/79  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55375.1 GT:GENE BAD55375.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 546279..547124 GB:FROM 546279 GB:TO 547124 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55375.1 LENGTH 281 SQ:AASEQ MARTLANQSLRQHRSLADMDIPLAFFERTERGFEALPMAVSAWSPDMVNGPAICGLLGGALESAHRPDGFIPARLTVDLFRPTLRKPVEVTTTEVRRGTRIAVADAELLQEGRAVARATAVFLRPSAQPPGRVWTRQERPDLPPAELLDGSSSHLWHTDTTGWSARLSEHQNAERKRNFQQPISVILGEPPSPLAAAATIGESTSMMTHWGDRGVGFINADLTLTMSRLPHGPIGVQAENHFSTDGVAVGNATLFDRDGFFGACVVTALANPAAQVDFSGA GT:EXON 1|1-281:0| SEG 88->100|vevtttevrrgtr| RP:PDB:NREP 1 RP:PDB:REP 26->259|3cjyA|1e-09|18.1|221/249| HM:PFM:NREP 2 HM:PFM:REP 24->54|PF12492|2.7e-16|41.9|31/31|DUF3705| HM:PFM:REP 73->114|PF03061|0.0006|26.2|42/79|4HBT| RP:SCP:NREP 1 RP:SCP:REP 101->133|2hboA1|1e-04|21.2|33/142|d.38.1.5| HM:SCP:REP 5->125|1zkiA1|9e-08|22.3|121/0|d.38.1.5|1/1|Thioesterase/thiol ester dehydrase-isomerase| OP:NHOMO 31 OP:NHOMOORG 14 OP:PATTERN -------------------------------------------------------------------- --------------142----3---3------3343111-----------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 236 STR:RPRED 84.0 SQ:SECSTR #########################cEEEETTEEEEEEEccGGGEEccTTccEEHHHHHHHHHHHHHHTccEEEEEEEEccccTTcEEEEEEEEEEEccccEEEEEEEEETTEEEEEEEEEEccccccccccccccccGGGcccccccccccTTccTGGGEEEEEcccTTccTTEEEEEEEEEEEEEETTcccccHHHHHHHTTHHHHHHHHHTcccEEcEEEEEEcccccccEEEEEEEEEEETTEEEEEEEEEcTTccE#################### DISOP:02AL 1-12, 280-281| PSIPRED cccHHHHHHHHHHHHHHHcccccccEEEccccccccccccccccHHHHccccHHHHHHHHHHHcccccccEEEEEEEEEccccccccEEEEEEEEccccEEEEEEEEEEEccEEEEEEEEEEEEcccccccccccccccccccccccccccccccccccccccEEEccccccccccEEEcccccccccccHHHHHHHHHHHHcccccccccccccccccccEEEEEEEccccEEEEEEEEEEccccHHHHHHHHHHcccccEEEEHHHHHHHHHHcccccc //