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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55378.1
DDBJ      :             putative ferredoxin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  35/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.58.1
:62 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   1->61 1vjwA PDBj 2e-07 39.7 %
:RPS:SCOP  5->61 1fxdA  d.58.1.4 * 2e-04 30.9 %
:HMM:SCOP  1->64 1sj1A_ d.58.1.4 * 3.8e-09 32.8 %
:RPS:PFM   1->61 PF06902 * DUF1271 3e-07 43.3 %
:HMM:PFM   2->61 PF06902 * DUF1271 3.3e-10 25.5 55/64  
:BLT:SWISS 1->60 FER_MOOTH 6e-10 41.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55378.1 GT:GENE BAD55378.1 GT:PRODUCT putative ferredoxin GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 549712..549900 GB:FROM 549712 GB:TO 549900 GB:DIRECTION + GB:PRODUCT putative ferredoxin GB:PROTEIN_ID BAD55378.1 LENGTH 62 SQ:AASEQ MKVSVDLDQCEANGICVGFAPDVFELDDDDQLHILTDEVPADRRAEVEDAVAQCPKAALKLL GT:EXON 1|1-62:0| BL:SWS:NREP 1 BL:SWS:REP 1->60|FER_MOOTH|6e-10|41.7|60/63| BL:PDB:NREP 1 BL:PDB:REP 1->61|1vjwA|2e-07|39.7|58/59| RP:PFM:NREP 1 RP:PFM:REP 1->61|PF06902|3e-07|43.3|60/63|DUF1271| HM:PFM:NREP 1 HM:PFM:REP 2->61|PF06902|3.3e-10|25.5|55/64|DUF1271| RP:SCP:NREP 1 RP:SCP:REP 5->61|1fxdA|2e-04|30.9|55/58|d.58.1.4| HM:SCP:REP 1->64|1sj1A_|3.8e-09|32.8|64/66|d.58.1.4|1/1|4Fe-4S ferredoxins| OP:NHOMO 59 OP:NHOMOORG 35 OP:PATTERN -------------------------------------------------------------------- ---1----------13311-13--2311111224441223--11-----------------11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111------------1-------111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 61 STR:RPRED 98.4 SQ:SECSTR cccEEcTTTcccccHHHHHcTTTEEEcTTccEEEcccccccTHHHHHHHHHHHcTTccEEc# DISOP:02AL 62-63| PSIPRED cEEEEEHHHcHHHccHHHHcccccEEccccEEEEEcccccHHHHHHHHHHHHHcHHHcEEcc //