Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55378.1
DDBJ : putative ferredoxin
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 35/915 : Eukaryota 0/199 : Viruses 0/175 --->[See Alignment]
d.58.1
:62 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 1->61 1vjwA PDBj 2e-07 39.7 %
:RPS:SCOP 5->61 1fxdA d.58.1.4 * 2e-04 30.9 %
:HMM:SCOP 1->64 1sj1A_ d.58.1.4 * 3.8e-09 32.8 %
:RPS:PFM 1->61 PF06902 * DUF1271 3e-07 43.3 %
:HMM:PFM 2->61 PF06902 * DUF1271 3.3e-10 25.5 55/64
:BLT:SWISS 1->60 FER_MOOTH 6e-10 41.7 %
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55378.1
GT:GENE BAD55378.1
GT:PRODUCT putative ferredoxin
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION 549712..549900
GB:FROM 549712
GB:TO 549900
GB:DIRECTION +
GB:PRODUCT putative ferredoxin
GB:PROTEIN_ID BAD55378.1
LENGTH 62
SQ:AASEQ MKVSVDLDQCEANGICVGFAPDVFELDDDDQLHILTDEVPADRRAEVEDAVAQCPKAALKLL
GT:EXON 1|1-62:0|
BL:SWS:NREP 1
BL:SWS:REP 1->60|FER_MOOTH|6e-10|41.7|60/63|
BL:PDB:NREP 1
BL:PDB:REP 1->61|1vjwA|2e-07|39.7|58/59|
RP:PFM:NREP 1
RP:PFM:REP 1->61|PF06902|3e-07|43.3|60/63|DUF1271|
HM:PFM:NREP 1
HM:PFM:REP 2->61|PF06902|3.3e-10|25.5|55/64|DUF1271|
RP:SCP:NREP 1
RP:SCP:REP 5->61|1fxdA|2e-04|30.9|55/58|d.58.1.4|
HM:SCP:REP 1->64|1sj1A_|3.8e-09|32.8|64/66|d.58.1.4|1/1|4Fe-4S ferredoxins|
OP:NHOMO 59
OP:NHOMOORG 35
OP:PATTERN -------------------------------------------------------------------- ---1----------13311-13--2311111224441223--11-----------------11----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------111------------1-------111------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 61
STR:RPRED 98.4
SQ:SECSTR cccEEcTTTcccccHHHHHcTTTEEEcTTccEEEcccccccTHHHHHHHHHHHcTTccEEc#
DISOP:02AL 62-63|
PSIPRED cEEEEEHHHcHHHccHHHHcccccEEccccEEEEEcccccHHHHHHHHHHHHHcHHHcEEcc
//
[GTOP]
