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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55390.1
DDBJ      :             putative two-component system sensor kinase
Swiss-Prot:             

Homologs  Archaea  13/68 : Bacteria  635/915 : Eukaryota  6/199 : Viruses  0/175   --->[See Alignment]
a.274.1a.30.2d.122.1d.123.1
:511 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   272->490 3dgeA PDBj 4e-12 27.6 %
:RPS:PDB   200->249 2aswA PDBj 1e-08 26.0 %
:RPS:PDB   272->492 3d36B PDBj 3e-23 21.6 %
:RPS:SCOP  201->249 2aswA1  a.274.1.1 * 2e-08 26.5 %
:RPS:SCOP  272->448 1f51A  d.123.1.1 * 3e-14 10.3 %
:HMM:SCOP  250->334 2c2aA1 a.30.2.1 * 6e-17 34.1 %
:HMM:SCOP  338->500 1gkzA2 d.122.1.4 * 6e-45 40.1 %
:RPS:PFM   196->249 PF00672 * HAMP 2e-04 41.5 %
:RPS:PFM   274->332 PF00512 * HisKA 6e-05 47.5 %
:RPS:PFM   387->492 PF02518 * HATPase_c 2e-10 33.0 %
:HMM:PFM   384->494 PF02518 * HATPase_c 1.1e-33 47.3 110/111  
:HMM:PFM   269->331 PF00512 * HisKA 8.1e-22 49.2 63/68  
:HMM:PFM   181->249 PF00672 * HAMP 4.9e-17 42.6 68/70  
:BLT:SWISS 103->244 TCPI_VIBCH 5e-04 23.4 %
:BLT:SWISS 272->492 PHOR_BACSU 1e-20 31.3 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55390.1 GT:GENE BAD55390.1 GT:PRODUCT putative two-component system sensor kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(561496..563031) GB:FROM 561496 GB:TO 563031 GB:DIRECTION - GB:PRODUCT putative two-component system sensor kinase GB:PROTEIN_ID BAD55390.1 LENGTH 511 SQ:AASEQ MSTGRPGRDAARTAPGRLRQGREWIGHRLGAVPLRVTLVLALVVFAGLGLLVSGTVVTSALEKSLLARTDQQLRDAVTTRPRVRPTVPPPATDPRTPPSPFYIVSESTSGAGTLVLRPFNVDAAPDLSGTPVGEPVTVDSVGDAPVRWRVLTVVSGDDRTTIALPMTQNEETVQRLVMLQVVVGLAVLAVLALAAYFVIRRSLRPLRRVENIAAAIARGDLFRRVPVRGTNTEVDRLSRSLNGMLAQIQSAFAATEASEAAARESEARMRRFVADASHELRTPLTTIRGFAELYRQGATTDPAMFMDRIEHEARRMGLLVEDLLMLARLDAQRPLEIGTVDLLTVAGDAVHNARAVAAAADPAGPRRRIELDVHAGTGTLEVPGDEDRLRQVLANLLNNALTHTPPDAAVTVRLTPEPDEVILAVADTGPGLTPEAAERVFERFYRTDVSRARASGGSGLGLSIVQALVVAHGGSVSVDSAPGAGATFTVRLPRAGRRAPHRGAAGNVRSA GT:EXON 1|1-511:0| BL:SWS:NREP 2 BL:SWS:REP 103->244|TCPI_VIBCH|5e-04|23.4|141/620| BL:SWS:REP 272->492|PHOR_BACSU|1e-20|31.3|214/579| TM:NTM 2 TM:REGION 32->54| TM:REGION 178->199| SEG 31->54|avplrvtlvlalvvfaglgllvsg| SEG 74->98|rdavttrprvrptvpppatdprtpp| SEG 176->195|lvmlqvvvglavlavlalaa| SEG 250->271|safaateaseaaaresearmrr| SEG 346->368|agdavhnaravaaaadpagprrr| SEG 393->401|lanllnnal| SEG 450->463|srarasggsglgls| SEG 493->506|pragrraphrgaag| BL:PDB:NREP 1 BL:PDB:REP 272->490|3dgeA|4e-12|27.6|214/237| RP:PDB:NREP 2 RP:PDB:REP 200->249|2aswA|1e-08|26.0|50/56| RP:PDB:REP 272->492|3d36B|3e-23|21.6|204/221| RP:PFM:NREP 3 RP:PFM:REP 196->249|PF00672|2e-04|41.5|53/69|HAMP| RP:PFM:REP 274->332|PF00512|6e-05|47.5|59/69|HisKA| RP:PFM:REP 387->492|PF02518|2e-10|33.0|106/112|HATPase_c| HM:PFM:NREP 3 HM:PFM:REP 384->494|PF02518|1.1e-33|47.3|110/111|HATPase_c| HM:PFM:REP 269->331|PF00512|8.1e-22|49.2|63/68|HisKA| HM:PFM:REP 181->249|PF00672|4.9e-17|42.6|68/70|HAMP| GO:PFM:NREP 7 GO:PFM GO:0004871|"GO:signal transducer activity"|PF00672|IPR003660| GO:PFM GO:0007165|"GO:signal transduction"|PF00672|IPR003660| GO:PFM GO:0016021|"GO:integral to membrane"|PF00672|IPR003660| GO:PFM GO:0000155|"GO:two-component sensor activity"|PF00512|IPR003661| GO:PFM GO:0007165|"GO:signal transduction"|PF00512|IPR003661| GO:PFM GO:0016020|"GO:membrane"|PF00512|IPR003661| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 2 RP:SCP:REP 201->249|2aswA1|2e-08|26.5|49/54|a.274.1.1| RP:SCP:REP 272->448|1f51A|3e-14|10.3|146/181|d.123.1.1| HM:SCP:REP 250->334|2c2aA1|6e-17|34.1|85/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 338->500|1gkzA2|6e-45|40.1|162/193|d.122.1.4|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 2320 OP:NHOMOORG 654 OP:PATTERN ------------------------1---1--1------111-1----114623--------------- 37B3633577744245544-472254444444867722744454655454445574441176A-63465A3311123312424--1--551--1-------41-2315D3--------------1-122-111122KBBDC223D3B5BJ443242311111137-FLLR1------------5832323-53688888667776888735223288946643B7333334BC211111111111111211112121--1-111------311211---22211111--22222222222----------------111----283665554565-514-331-112231181242B9565211245442--19338885-----246255323331411111111121-54444667345-466224254411433-34112113-4211111111-2221C74------------------------------214112---369969B4444388994444157974434--6649454465344213222-12---------1435E443211521E3336-A57696635ECIBIT24------------------------1112122531-11221111-1-222111-111----2231------121-1222222222222-22222222222222222211111-1112222232223212122222-2222--211111111111----11111----1-51-----------------------11-34452414454252-1445---------1-11111111111--1374644121------4-22--------------1--------------------------1-211211118- ----11--------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------2-1------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 297 STR:RPRED 58.1 SQ:SECSTR ###################################################################################################################################################################################################HHHHHHHHHHHHHHHHTTccHHHHTcHHHHHHHHHHHHHHHHHHTTccccTTcTTTTHHHHHHHHHHHHTccTTTcccccHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEccccEEEEcHHHHHHHHHHHHHHHHHTcTTcEEEEEEEEEETTEEEEEEEEccccccHHHHHHTTcTTcccccTTTTGGGccccHHHHHHHHHHHTTcEEEEEEETTTEEEEEEEE################### DISOP:02AL 1-26, 298-303, 449-456, 495-511| PSIPRED ccccccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEcccccEEEEccccccccccccccccccccEEEccccccccEEEEEEEccccEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHccEEEEEEEccccEEEEEcHHHHHHHHHHHHHHHHHccccccEEEEEEEEEccEEEEEEEEccccccHHHHHHHcccEEccccccccccccccHHHHHHHHHHHHcccEEEEEEEcccEEEEEEEEccccccccccccccccccc //