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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55392.1
DDBJ      :             putative trehalose-6-phosphate synthase
Swiss-Prot:             

Homologs  Archaea  12/68 : Bacteria  301/915 : Eukaryota  133/199 : Viruses  0/175   --->[See Alignment]
c.87.1
:501 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   58->478 1uquB PDBj 9e-59 36.7 %
:RPS:PDB   7->478 3copA PDBj 8e-30 11.4 %
:RPS:SCOP  13->478 1gz5A  c.87.1.6 * 6e-44 32.6 %
:HMM:SCOP  13->482 1gz5A_ c.87.1.6 * 3.9e-138 46.5 %
:RPS:PFM   37->476 PF00982 * Glyco_transf_20 e-108 49.4 %
:HMM:PFM   15->477 PF00982 * Glyco_transf_20 1.9e-151 45.4 456/474  
:BLT:SWISS 7->482 OTSA_MYCSJ 0.0 76.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55392.1 GT:GENE BAD55392.1 GT:PRODUCT putative trehalose-6-phosphate synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(563817..565322) GB:FROM 563817 GB:TO 565322 GB:DIRECTION - GB:PRODUCT putative trehalose-6-phosphate synthase GB:PROTEIN_ID BAD55392.1 LENGTH 501 SQ:AASEQ MRTGANAPQGAGSGFVVVANRLPVDLERLPDGSTRWKRSPGGLVTALEPVLRNNKGAWVGWAGVPDVDVDPIIEDGLELHPVPLSAQEVADYYEGFSNGTLWPLYHDVIVRPTYDRAWWAAYVQVNRRFAEETAKVAAEGATVWVQDYQLQLVPKMLRMLRPDLTIGFFLHIPFPPVELFMQMPWRTEIIEGLLGADLIGFHLPGGAQNFLYLARRLAGQPTSRGTVGVRSKLGVVQVGFRTVRVGAFPISIASAELDEQSRRRSIRERAAKIRAELGNPKNILLGVDRLDYTKGIDIRLNALEELLVEGRFDPAETVMVQLATPSRERVESYIQMRGDIERQVGRINGEFARVGYPVVHYLHRPIPRDELLAFFVAADVMLVTPLRDGMNLVAKEYVACHSGLNGALVLSEFTGAAAELRQAYLCNPHDLDSVKDAIVSALEDDRETKRRRMRSLRRQVLAHDVDRWARAFLDALAQDQVAGSALITENDDYGDNDAPSR GT:EXON 1|1-501:0| BL:SWS:NREP 1 BL:SWS:REP 7->482|OTSA_MYCSJ|0.0|76.1|476/483| SEG 64->73|vpdvdvdpii| SEG 446->458|retkrrrmrslrr| BL:PDB:NREP 1 BL:PDB:REP 58->478|1uquB|9e-59|36.7|401/449| RP:PDB:NREP 1 RP:PDB:REP 7->478|3copA|8e-30|11.4|455/476| RP:PFM:NREP 1 RP:PFM:REP 37->476|PF00982|e-108|49.4|433/455|Glyco_transf_20| HM:PFM:NREP 1 HM:PFM:REP 15->477|PF00982|1.9e-151|45.4|456/474|Glyco_transf_20| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00982|IPR001830| GO:PFM GO:0005992|"GO:trehalose biosynthetic process"|PF00982|IPR001830| RP:SCP:NREP 1 RP:SCP:REP 13->478|1gz5A|6e-44|32.6|448/456|c.87.1.6| HM:SCP:REP 13->482|1gz5A_|3.9e-138|46.5|452/456|c.87.1.6|1/1|UDP-Glycosyltransferase/glycogen phosphorylase| OP:NHOMO 891 OP:NHOMOORG 446 OP:PATTERN ------------------11111-1---------1-----------1-1------------111---- 1-11311111111111111-111111111111111112221222111111111111-1--22112111111---------1-1--1-----1-1---------1111111----------------------------------1111---------11111111------------------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----1---11----------1--2-----1111111112122----------1-11111111121-1--12111111111-1111-1111---1111111111112-11------------------------------111------13333334222233332222223341111--112-121111111----1---------------1-------1-1---------11-1-112222122--------------------------------------------------------------11-------11---111111111111-1111111111111111111111-----11111111111111111-11---11-----------------------------1----------------1111111-1-2---------1----1---------------------------1112122111--------11----------------------------------------------------- --1133------3333333377766653333334444333333322334333333333333333333313433334424433333365-353333332222238781-812------------------------------------------------------41111623--4222G223226BEC3C52369885 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 472 STR:RPRED 94.2 SQ:SECSTR ######TTTccccHHHHHHTTHHHHHHHTTcEEEEEEEccHHHHHHcTTcEEEEEEccTTccEEHHHTccccHHTTcEEEEEEETTEEEEEEEcHHHHcccccccccTTccccTTHHHHHHHHHHHHHHHTTTccTTccccEEEEETGGGTTHHHHHHHTTcccEEEEEEccTTcccEEcGGGGGGTTccGGGccTTTTEETTEEEHHHHHHHccEEEEccHHHHHHTTcHHHHTTcHHHHHHHHHTTcEEEccccccTTTccTTTcTTcccccHcTTcGGGGHHHHHHHHHHHTccccTTccEEEEEcccccTTTTHHHHHHHHHHHHTTcEEEEEEcccHHHHHHHHHHHHHcTTTEEEEEEcccHHHHHHHHTTccEEEEccccccccHHHHHHHHTcHHHHHHcccccHHHHHTTccccEEEccccHHHHHHHHHHHHHHHTcHHHHHHHHHHHHHccccHHHHHHHHHHHHHH####################### DISOP:02AL 1-14, 66-70, 496-501| PSIPRED ccccccccccccccEEEEEEcccEEEEEcccccEEEEcccccHHHHHHHHHHHccEEEEEEcccccccHHHHHcccEEEEEEEccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHcccccEEEEEccHHHHHHHHHHHHccccEEEEEEEccccHHHHHHHcHHHHHHHHHHHHccEEEEccHHHHHHHHHHHHHHHccccccccccccccccEEEEccEEEEEEEEEEcccHHHHHHHHccccHHHHHHHHHHHHccccEEEEEEccccccccHHHHHHHHHHHHHHcHHHHccEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHccccccEEEEEcccccHHHHHHHHHHccEEEEccccccccccHHEEEEEEcccccEEEEEcccccHHHHcccEEEccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHccHHHccccHHccccccccc //