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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55394.1
DDBJ      :             putative hydrolase
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  173/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.69.1
:277 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   27->277 3e3aB PDBj 6e-65 50.4 %
:RPS:PDB   6->277 3e3aB PDBj 7e-54 49.4 %
:RPS:SCOP  4->274 1mt3A  c.69.1.7 * 1e-28 22.4 %
:HMM:SCOP  1->275 1q0rA_ c.69.1.28 * 2.3e-52 32.0 %
:RPS:PFM   79->261 PF00561 * Abhydrolase_1 3e-05 31.1 %
:HMM:PFM   58->271 PF00561 * Abhydrolase_1 1.9e-17 24.5 212/231  
:BLT:SWISS 24->276 PRXC_STRAU 3e-12 32.1 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55394.1 GT:GENE BAD55394.1 GT:PRODUCT putative hydrolase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 565827..566660 GB:FROM 565827 GB:TO 566660 GB:DIRECTION + GB:PRODUCT putative hydrolase GB:PROTEIN_ID BAD55394.1 LENGTH 277 SQ:AASEQ MPLATVNGISLNYQVKGDRAKGTEAKGSAPLVVMIMGTGSPGRVWELHQVPALLAAGYRVCTFDNRGIAPSFEAADGITIDDLVGDTAGLIELLDEGPALVVGTSMGARVAQELALARPDLVRKAVFMAGHGRLDQFQKTLSLGEHDLDASGITLPPKYEAAVTAVMNLSPATLADANAARDWLDLFEFTGGPVTPGIRAQRRMDHDFDRVQAYRGITVPCLAVGFADDRMIPAYLTREVAEAIPGARYQEVPDAGHFGYLERPEIVNKILLDFFAA GT:EXON 1|1-277:0| BL:SWS:NREP 1 BL:SWS:REP 24->276|PRXC_STRAU|3e-12|32.1|240/278| BL:PDB:NREP 1 BL:PDB:REP 27->277|3e3aB|6e-65|50.4|250/275| RP:PDB:NREP 1 RP:PDB:REP 6->277|3e3aB|7e-54|49.4|261/275| RP:PFM:NREP 1 RP:PFM:REP 79->261|PF00561|3e-05|31.1|164/211|Abhydrolase_1| HM:PFM:NREP 1 HM:PFM:REP 58->271|PF00561|1.9e-17|24.5|212/231|Abhydrolase_1| RP:SCP:NREP 1 RP:SCP:REP 4->274|1mt3A|1e-28|22.4|259/293|c.69.1.7| HM:SCP:REP 1->275|1q0rA_|2.3e-52|32.0|266/297|c.69.1.28|1/1|alpha/beta-Hydrolases| OP:NHOMO 263 OP:NHOMOORG 184 OP:PATTERN -----------------------21--2---------------1--1---1----------------- ----3---------12222-22112222222242221422--221----12-2-1--1--121-1214132-----------1------------------------1-----------------11--1--1-1---------3--------------------------------------21---------1111111----11--------1----------------1------------------------------1---------------------------------------------------------------1-----------------------1----11-----1----1----------1-----1-412---1111-111111--1-1-1------1213-122-1111112151----11-----2-11111111------2-------------------------------1-1----1111112111----2231------1122-21-11-------122-2---1----------------1--1--1------1----222-112--11-12--------------------------------------------------------------------------------------------------------------------------------------1------------------------------1-------------------------------1---1111--122--1------------------------------------------------------------------------------------------------------ ---------1----1-----------------------------------1--1--------------------------------------------------------2---------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 277 STR:RPRED 100.0 SQ:SECSTR EEcTTccccEEEEEEEcccccccccccccEEEEEEccTTccGGGGTTTHHHHHHHTTEEEEEEccTTcGGGGTTcccccHHHHHHHHHHHHHHTTcccEEEEEETHHHHHHHHHHHHcGGGEEEEEEEcccccccHHHHHHHHHHHHHHHTTccccHHHHHHHHHHHHccHHHHTcHHHHHHHHHHHHHccccccHHHHHHTTcccccccGGGGGGccccEEEEEETTcccccHHHHHHHHHHcTTEEEEEETTccTTHHHHcHHHHHHHHHHHHHH PSIPRED ccEEEEccEEEEEEEEccccccccccccccEEEEEccccccHHHccHHHHHHHHccccEEEEEccccccccccccccccHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHccccEEEEEEEcccccccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHcccccHHHHHcccccEEEEEccccccccHHHHHHHHHHccccEEEEEccccccHHHccHHHHHHHHHHHHcc //