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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55397.1
DDBJ      :             putative DNA-binding protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.35.1
:387 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->55 2b5aA1 a.35.1.3 * 1.1e-06 32.7 %
:HMM:PFM   7->55 PF01381 * HTH_3 7.8e-05 24.5 49/55  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55397.1 GT:GENE BAD55397.1 GT:PRODUCT putative DNA-binding protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 567675..568838 GB:FROM 567675 GB:TO 568838 GB:DIRECTION + GB:PRODUCT putative DNA-binding protein GB:PROTEIN_ID BAD55397.1 LENGTH 387 SQ:AASEQ MHRGARLRAAREAAGVGLREMARLTHYSPAYLSLVECGKRPVPPAVAAAYGAVLGELADGDPAGAEWVARVAASDVCGATLERLETAVDDLAVAYATAPPAELLVDIRRQLGGAARLLAGRTTLVQHRRLLVAAGWLALLAGTCHIDLGHRRAADVRLRAAREIARECEHREMAAWTLETRAWQHLVDREFGVAAELSEAARRMAPGGGSARIQATAQRGRALARLGDSAGGYGALRGVARLVSGLRAPERPEHHFRYDPAKADAYVATTLSWLGDPAAESYARHVLLDLERAACVRPRRIAMARLDLGLALVAAGKPEEATDVALAVVTSGRLVPSHHWRVADVVAAIGQRDRRGAALVRAAFRDTYAGPLSPGRWPNARDPAGPA GT:EXON 1|1-387:0| SEG 3->20|rgarlraareaagvglre| SEG 41->53|pvppavaaaygav| SEG 130->142|llvaagwlallag| SEG 151->162|rraadvrlraar| HM:PFM:NREP 1 HM:PFM:REP 7->55|PF01381|7.8e-05|24.5|49/55|HTH_3| HM:SCP:REP 1->55|2b5aA1|1.1e-06|32.7|55/0|a.35.1.3|1/1|lambda repressor-like DNA-binding domains| OP:NHOMO 6 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- ------------------------------------3------1--------------------1---1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------ ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-4, 380-387| PSIPRED ccHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHccccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHccccccccccEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccc //