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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55402.1
DDBJ      :             putative aminotransferase
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  859/915 : Eukaryota  188/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:389 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->383 3h14A PDBj 2e-57 42.0 %
:RPS:PDB   21->385 5bj4A PDBj 1e-46 31.7 %
:RPS:SCOP  5->388 2gb3A1  c.67.1.1 * 5e-45 21.2 %
:HMM:SCOP  1->388 1iayA_ c.67.1.4 * 1.7e-102 33.3 %
:RPS:PFM   43->383 PF00155 * Aminotran_1_2 1e-33 35.1 %
:HMM:PFM   31->383 PF00155 * Aminotran_1_2 9e-61 27.4 343/363  
:BLT:SWISS 6->387 AAT_THET8 5e-42 35.7 %
:PROS 233->246|PS00105|AA_TRANSFER_CLASS_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55402.1 GT:GENE BAD55402.1 GT:PRODUCT putative aminotransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 572151..573320 GB:FROM 572151 GB:TO 573320 GB:DIRECTION + GB:PRODUCT putative aminotransferase GB:PROTEIN_ID BAD55402.1 LENGTH 389 SQ:AASEQ MSRESRRSTIPPFYVMDVWKAAAERARTHGDVLVLAAGQPSTPAPAPVLRATKAAIDAELLGYTETFGILPLRRAIAEHHSRTYGYAVDPDDVVVTTGSSGAFTLIFLAAFDAGDTVVVARPGYPAYRNTLTALGCRVVELDCGPDTRFQPTVAMLDALPEPPAGLIVASPANPTGTMIDPAELAALARWCDEHGTLLVSDEIYHGITYGSAGADARTASAWETSRTAVVIGSVSKYFSMTGWRLGWMLAPADLRPALQRLASNMTVCPPAISQYAAVHAFGAEAKAELDGHVGRYATNRRLLLDGLAALGITDLAPADGAFYAYADIGHLTDDSLKWCAELLGQTGVALAPGIDFDTVAGHRFVRFSFAGATAEIEEALARLGRHLAS GT:EXON 1|1-389:0| BL:SWS:NREP 1 BL:SWS:REP 6->387|AAT_THET8|5e-42|35.7|373/385| PROS 233->246|PS00105|AA_TRANSFER_CLASS_1|PDOC00098| SEG 302->316|llldglaalgitdla| BL:PDB:NREP 1 BL:PDB:REP 3->383|3h14A|2e-57|42.0|352/359| RP:PDB:NREP 1 RP:PDB:REP 21->385|5bj4A|1e-46|31.7|357/366| RP:PFM:NREP 1 RP:PFM:REP 43->383|PF00155|1e-33|35.1|333/341|Aminotran_1_2| HM:PFM:NREP 1 HM:PFM:REP 31->383|PF00155|9e-61|27.4|343/363|Aminotran_1_2| GO:PFM:NREP 3 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00155|IPR004839| GO:PFM GO:0016769|"GO:transferase activity, transferring nitrogenous groups"|PF00155|IPR004839| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00155|IPR004839| RP:SCP:NREP 1 RP:SCP:REP 5->388|2gb3A1|5e-45|21.2|378/389|c.67.1.1| HM:SCP:REP 1->388|1iayA_|1.7e-102|33.3|381/428|c.67.1.4|1/1|PLP-dependent transferases| OP:NHOMO 5166 OP:NHOMOORG 1113 OP:PATTERN 44313123333333325522111464445475112333222226646645566-44345551224-23 5AC3844555526355544-453358434445666657A8466756462351ABB677116674757898557778773339344433456535--112426344746351111111111111113335332322445555445674445444333334222135347656132111241121244231127567777787968878884955477886686444444444B7222222222222221111314252442913289AA661525943333333233455333333333332222222222222454556555437264666666656434554333424-2355443335521245334311263266651111141A976658676633333333339-66866A577D41A66989C9889B76352577666787B5555555565545657111111111111111111111111111112148358GD7BLHJKINDABB9IIKHBABB6AIGEDCFD139AD78B88CAA8E75745545571111111224675187437674A7988-5544355557758A747221222222221211111112443333322383313211322211121221111213---5553------68563875554544445-5555544535545445446ADA872215666556555565664723533341-644454355554--1111111544456859222212-11111112666763632273DCBCAFBE797785777432324323411132222222321334545533412222263223355------------------------------------3232223222383 ----335-621-34444443675646733232233345555553233357447644334323233212221251422-1114342421-28444643344423646-27533646571332244E617-DN6-7392323513A52333133253443423534432522645367557*67548EFGg4T768B697B ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 389 STR:RPRED 100.0 SQ:SECSTR cccccHHHTccTHHHHHHHHcHHHHTccccccEEcccccccccccHHHHHHHHHHHHTTccccccTTccHHHHHHHHHHHHHTTcccccGGGEEEEcHHHHHHHHHHHHHccTTcEEEEEEcccTHHHHHHHHTTcEEEEEEccGGGTTcccHHHHTTccTTEEEEEEEcccTTTcccccHHHHHHHHHHHHHHTcEEEEEcTTTTcccccccccccGcGGGTcTTTEEEEEEcTTTTTcGGGccEEEEccHHHHHHHHHHHHTTTccccHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTccccccccTTEEEEEcTTTcccHHHHHHHHHHHTTEEcEEcGGGcGGTcTTEEEEEccccHHHHHHHHHHGGGHHHG DISOP:02AL 1-7| PSIPRED ccccHHHHHccccHHHHHHHHHHHHHHccccEEEcccccccccccHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHcccccccccEEEccccHHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHccEEEEEEccccccccccHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHcccEEEEEccccccEEccccccccHHHcccccccEEEEEccHHHHcccccEEEEEEccHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHccccEEEcccccEEEEEEcccccccHHHHHHHHHHHccEEEEccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHc //