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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55408.1
DDBJ      :             putative protease
Swiss-Prot:             

Homologs  Archaea  10/68 : Bacteria  401/915 : Eukaryota  111/199 : Viruses  0/175   --->[See Alignment]
b.69.7c.69.1
:716 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   22->690 2bklB PDBj 1e-60 31.2 %
:RPS:PDB   154->245 2bbkH PDBj 2e-06 13.0 %
:RPS:PDB   282->397 3d9bA PDBj 7e-04 20.2 %
:RPS:PDB   479->716 1e5tA PDBj 3e-38 31.5 %
:RPS:SCOP  3->440 1e5tA1  b.69.7.1 * 1e-27 17.2 %
:RPS:SCOP  443->714 1e5tA2  c.69.1.4 * 2e-79 35.3 %
:HMM:SCOP  3->443 1qfmA1 b.69.7.1 * 2.3e-100 37.7 %
:HMM:SCOP  443->715 1sfrA_ c.69.1.3 * 8.2e-39 26.5 %
:RPS:PFM   16->429 PF02897 * Peptidase_S9_N 7e-82 49.0 %
:RPS:PFM   505->694 PF00326 * Peptidase_S9 3e-26 42.1 %
:HMM:PFM   10->436 PF02897 * Peptidase_S9_N 1.2e-114 40.2 396/415  
:HMM:PFM   496->713 PF00326 * Peptidase_S9 6.1e-67 43.8 210/213  
:BLT:SWISS 10->714 PTRB_MORLA e-135 39.7 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55408.1 GT:GENE BAD55408.1 GT:PRODUCT putative protease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 578346..580496 GB:FROM 578346 GB:TO 580496 GB:DIRECTION + GB:PRODUCT putative protease GB:PROTEIN_ID BAD55408.1 LENGTH 716 SQ:AASEQ MSVESGVAAPIAKRVPTERVHHGDVFVDEYEWLRDKENPEVIAYLEAENAYTEAQTAHLSGLREKIFEEIKSRTQETDLSVPTRMGEYWYYSRSFEGKQYGVHCRCPIDTTADAAAAWNPPQLEAEGEIPGEEVLLDSNELAEGHEFFALGAFSVSHDGTLLAYSVDTVGDERYTLRIKDLRTGELLADEIAGTAPGATWSLDGTHVFYQTVDESWRPDTVWRHRLGTGTDADVRVFHEPDERYWVSIGATRSEKYLMIWVGSKITTEGWVLESDDPEGEFRVLLPRREGVEYSAEHAVIGGQDRFLILHNDVVDGVKAQNFVLAEASVDNPADLRILIGHRDDVRLEDIDAFADHLVLSYRREALTRLAVWPLTETGYGDLRELEFDLELFAVGMGGNPEWAQPTLRLGLTSFITPMRVYDYVPATGELLLRKEQPVLGGYDAGDYRQRREWAVAADGTRVPISLVWKTGVADPGVEPRPLLLYGYGSYEASMDPSFSVARLSLLDRGMVFAVAHVRGGGEMGRLWYENGKTLTKKNTFTDFVACARHLIDTGVTAPDRLVADGGSAGGLLMGAVANLAPELFAGILANVPFVDPLTSILDPSLPLTVIEWDEWGNPLADKDVYEYMKSYSPYENVEAKDYPAILAITSLNDTRVLYVEPAKWVAKLRATKTGDAPLLLKTEMSAGHGGVSGRYAKWKEVAFEYAWVLDTAGLGE GT:EXON 1|1-716:0| BL:SWS:NREP 1 BL:SWS:REP 10->714|PTRB_MORLA|e-135|39.7|675/690| SEG 381->392|dlrelefdlelf| BL:PDB:NREP 1 BL:PDB:REP 22->690|2bklB|1e-60|31.2|619/677| RP:PDB:NREP 3 RP:PDB:REP 154->245|2bbkH|2e-06|13.0|92/355| RP:PDB:REP 282->397|3d9bA|7e-04|20.2|114/1045| RP:PDB:REP 479->716|1e5tA|3e-38|31.5|238/710| RP:PFM:NREP 2 RP:PFM:REP 16->429|PF02897|7e-82|49.0|382/396|Peptidase_S9_N| RP:PFM:REP 505->694|PF00326|3e-26|42.1|183/208|Peptidase_S9| HM:PFM:NREP 2 HM:PFM:REP 10->436|PF02897|1.2e-114|40.2|396/415|Peptidase_S9_N| HM:PFM:REP 496->713|PF00326|6.1e-67|43.8|210/213|Peptidase_S9| GO:PFM:NREP 4 GO:PFM GO:0004252|"GO:serine-type endopeptidase activity"|PF02897|IPR004106| GO:PFM GO:0006508|"GO:proteolysis"|PF02897|IPR004106| GO:PFM GO:0006508|"GO:proteolysis"|PF00326|IPR001375| GO:PFM GO:0008236|"GO:serine-type peptidase activity"|PF00326|IPR001375| RP:SCP:NREP 2 RP:SCP:REP 3->440|1e5tA1|1e-27|17.2|412/430|b.69.7.1| RP:SCP:REP 443->714|1e5tA2|2e-79|35.3|266/280|c.69.1.4| HM:SCP:REP 3->443|1qfmA1|2.3e-100|37.7|406/430|b.69.7.1|1/1|Peptidase/esterase 'gauge' domain| HM:SCP:REP 443->715|1sfrA_|8.2e-39|26.5|257/0|c.69.1.3|1/1|alpha/beta-Hydrolases| OP:NHOMO 929 OP:NHOMOORG 522 OP:PATTERN ------1--------1--------------1-----------------------1111111------- 3321112222211121222-22112332232132222222111223311221222111-1111-111--121111111---------------------3231232-2-1---------------11-11111-1111111-----111111-11-----------42211------------1-1-----1---------------------------------------------------------------------------------------------1---111---11------------------------------------------------------------------1---------1-13334111111122211-1211211111111111-11211212131-21112242221111232------------------1113--2-----------1111121221-2222----1232221----11111111111111-1111-1111---------1--------1--------2-1111111------2---------------------------42-----------------------------3312--331313233311233332334322--1-11-------11111111112111111-11111111111111111111111111111111111111111113--111111-111111111111---3------------1--------------------------1-11111111111111111-----------221111114422222222222221111------------------2--------------------------------------1- ----224-634-556--1----------------------------------1------------------------------------111-1112-2-111111-2944363342212122134172BE41433213262212222112225222221121-111211---22-352H111458588-582343534 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 709 STR:RPRED 99.0 SQ:SECSTR #######ccccccccccEEEETTEEEEcTTGGGGcTTcHHHHHHHHHHHHHHHHHHHTcTTHHHHHHHHHHHHHcccEEcccEEETTEEEEEEEcTTccccEEEEEEcTccTccEEEEEccEEEEETTTcccEEEEcGGGcccccccEEEEEEEEcTTccEEEEEEEETTccccEEEEEETTTccccccccccccTccEEcTTccccTTccGGGGGGGcEEEEEETTccGGGcEEEEcccccTTcEEEEEEcTTcccEEEEEEETTTEEEEEEEcTTccccEEEEEcccccEEEEEEEEETEEEEEEEEEcHETTcccEEEccccccEEEEEEEEETTTGGGTTEEccccEEcTTcccEEEEcccccEEEEEETTEETTEEEEcccEEEEEEcEEEEETTTTcEEEEEEEcTTccccEEEEEEETTTEEcccEEEcTTTccTHHHHHHHHHHHHHTcccccEEEEETTEEEEEEEccccccEEEEccccTTccccccccHHHHHHHHHccEEEEEccTTccTTHHHHHHTTcGGGTHHHHHHHHHHHHHHHHTTcccGGGEEEEEETHHHHHHHHHHHHcGGGccEEEEEcccccTTTGGGcTTGGGGHHHHccTTcHHHHHHHHHHcGGGcccccccTccccEEEEEEETTcccccTHHHHHHHHHHHHHTTccccEEEEEEccccccTTccHHHHHHHHHHHHHHHHHHHTccc DISOP:02AL 1-6| PSIPRED ccccccccccccccccEEEEEcccEEEccHHHHcccccHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHcccccccccEEEccEEEEEEEccccccEEEEEEEcccccccEEccccccccccccccccEEEEEHHHccccccEEEEEEEEEcccccEEEEEEEcccccEEEEEEEEccccEEccccccccccEEEEEEcccEEEEEEccccccccEEEEEEccccccccEEEEEEccccEEEEEEEEccccEEEEEEEccccccEEEEEEEcccccEEEEEccccccEEEEEEEEccccEEEEEEEccccccccccEEEEEEEccccccEEEEEEcccccEEEEEEEEEccEEEEEEEEcccEEEEEEEccccccccEEEEEcccccEEEEEcccccccccEEEEEEEccccccEEEEEEccccEEEEEEEccccccccccccEEEEEEEEcccccEEEEEEEEcccccccccccccEEEEEEccccccccccccHHHHHHHHcccEEEEEEccccccccHHHHHHHHHHcccccHHHHHHHHHHHHHcccccHHHEEEEEEcHHHHHHHHHHHccccEEEEEEEEcccccHHHHHcccccccccHHHHHcccccccHHHHHHHHHcccHHHHccccccEEEEEEccccccccHHHHHHHHHHHHHHcccccEEEEEEEccccccccccHHHHHHHHHHHHHHHHHHccccc //