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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55414.1
DDBJ      :             putative regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  62/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.93.1
:358 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   37->319 1qo0B PDBj 1e-06 23.7 %
:RPS:PDB   11->355 3eafA PDBj 3e-15 13.1 %
:RPS:SCOP  11->332 1usgA  c.93.1.1 * 5e-23 17.4 %
:HMM:SCOP  11->354 1qo0A_ c.93.1.1 * 1e-46 28.8 %
:HMM:PFM   31->96 PF01094 * ANF_receptor 0.00088 32.3 65/348  
:BLT:SWISS 37->319 AMIC_PSEAE 2e-06 24.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55414.1 GT:GENE BAD55414.1 GT:PRODUCT putative regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(585248..586324) GB:FROM 585248 GB:TO 586324 GB:DIRECTION - GB:PRODUCT putative regulator GB:PROTEIN_ID BAD55414.1 LENGTH 358 SQ:AASEQ MAAFGETPEGTIEILNIVPMRGPGGILAPSCEAAISLAAEEINAGAGILGREIRTTNIDGGRAPELVATEVAALLATGMVDAITGWHTSAVRRAVAAANGGRVPYLFATSHEGLPDEQPGVLMLGEHPAGHTLAAVRWARRELGVRRWAIIGNDYIWPREIAKAVRRVLTDPADVVLEQFVPHGLPDHTDFLTHPALDRADGVLILMVGAEVAAFNRQFAATGRADRQMRLSPAADENVLLAAGPAAHRNLFVPSSFFLGDRCADGAARRARYRRRYGAFAPALTTFSNAAYEALHTLAGLAGAVGSLEVPRLHRALLDGVRYQTPGGTRGFRGNQAVQTGYLARVNGVDFEIVDRIW GT:EXON 1|1-358:0| BL:SWS:NREP 1 BL:SWS:REP 37->319|AMIC_PSEAE|2e-06|24.1|278/385| SEG 65->77|elvatevaallat| SEG 90->98|avrravaaa| SEG 261->283|drcadgaarraryrrrygafapa| BL:PDB:NREP 1 BL:PDB:REP 37->319|1qo0B|1e-06|23.7|278/374| RP:PDB:NREP 1 RP:PDB:REP 11->355|3eafA|3e-15|13.1|343/379| HM:PFM:NREP 1 HM:PFM:REP 31->96|PF01094|0.00088|32.3|65/348|ANF_receptor| RP:SCP:NREP 1 RP:SCP:REP 11->332|1usgA|5e-23|17.4|316/345|c.93.1.1| HM:SCP:REP 11->354|1qo0A_|1e-46|28.8|340/0|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 91 OP:NHOMOORG 62 OP:PATTERN -------------------------------------------------------------------- ----1--2112----------2---2------21-12221------------1--------------1-------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------1---------------1-444---1-221------------23-22-22----211----1----1-----------1-1---------------------------------------------------------11-1-----------------12--1-------1---1-1-11----1-1--------------------------------------------1---------------------------------11-----------------------1------1-------------------------------------------------------------------------------------------------------1-----------------------------1--------------2-1------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 345 STR:RPRED 96.4 SQ:SECSTR ##########EEEEEEEEccccTTHHHHHHHHHHHHHHHHHHHcEEcTTccEEEEEEEEcTTcHHHHHHHHHHHHHTTcccEEEEccHHHHHHHHHHHHHHTcEEEEEccccGGGTTcTTEEcccccHHHHHHHHHHHHHHHHccEEEEEEcTTcHHHHTTHHHHHHHTGGGEEEEEEEEccTTccHHHHHHHHHHTTcccEEEEcccHHHHHHHHHHHHHHTcccEEEEcGGGccTTHHHHHcGGGTTcEEEEEccccGGcTTcHHHHHHHHHHHTTccGGGccHHHHHHHHHHHHHHHHHTTccHHHHHHHTHHHHHHHHHHcccccTTcccccccccEEEEEETTccEEEEE### DISOP:02AL 1-2, 4-7| PSIPRED cccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEEccccHHHHHHHHHHHHHcccEEEEEccccHHHHHHHHHHHHcccEEEEEccccccccccccEEEEccccHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHHHHcccEEEEEEEccccccHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHccccccEEEEEEcccHHHHHHHcHHHHccEEEEcccccccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHccccccccEEEEccccEEEcEEEEEEEccEEEEEEEEc //