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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55415.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  11/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.4.5
:141 amino acids
:SECSTR
:PSIPRED
:BLT:PDB   33->140 3g3zA PDBj 4e-06 25.0 %
:RPS:PDB   14->140 2a61A PDBj 8e-14 19.7 %
:RPS:SCOP  14->136 2fbiA1  a.4.5.28 * 2e-17 23.6 %
:HMM:SCOP  4->141 1jgsA_ a.4.5.28 * 1.1e-24 34.3 %
:HMM:PFM   35->92 PF01047 * MarR 5.6e-14 36.2 58/59  
:HMM:PFM   98->136 PF01408 * GFO_IDH_MocA 0.0003 42.1 38/120  
:BLT:SWISS 16->131 YHBI_BACSU 1e-08 33.3 %
:PROS 67->101|PS01117|HTH_MARR_1

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55415.1 GT:GENE BAD55415.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 586377..586802 GB:FROM 586377 GB:TO 586802 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD55415.1 LENGTH 141 SQ:AASEQ MTTIVGGHATLHGALRAAERRWLRHLDAALCARQLTADQWSMLCNLSAEAGITMSELAARSQLAPSSATRHADYLAERSLIFRVAAEEDRRRILIGLSKRGAELVAAVRADEEQAEQALRAKLGARRYAELLRLLDAVAEQ GT:EXON 1|1-141:0| BL:SWS:NREP 1 BL:SWS:REP 16->131|YHBI_BACSU|1e-08|33.3|108/154| PROS 67->101|PS01117|HTH_MARR_1|PDOC00861| BL:PDB:NREP 1 BL:PDB:REP 33->140|3g3zA|4e-06|25.0|108/140| RP:PDB:NREP 1 RP:PDB:REP 14->140|2a61A|8e-14|19.7|127/142| HM:PFM:NREP 2 HM:PFM:REP 35->92|PF01047|5.6e-14|36.2|58/59|MarR| HM:PFM:REP 98->136|PF01408|0.0003|42.1|38/120|GFO_IDH_MocA| RP:SCP:NREP 1 RP:SCP:REP 14->136|2fbiA1|2e-17|23.6|123/136|a.4.5.28| HM:SCP:REP 4->141|1jgsA_|1.1e-24|34.3|137/0|a.4.5.28|1/1|"Winged helix" DNA-binding domain| OP:NHOMO 11 OP:NHOMOORG 11 OP:PATTERN -------------------------------------------------------------------- -------1--1-------------------------11-------1-----------------------------------------------------------1------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-----11-----------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 134 STR:RPRED 95.0 SQ:SECSTR #######TTcHHHHHHHHHHHHHHHHHTTHHHHTccHHHHHHHHHHHHHccccHHHHHHHHTccHHHHHHHHHHHHHTTcEEEEEETTEEEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHH PSIPRED ccccccccccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHcccHHHHHHHHHHHHHcccEEEEEcccccEEEEEEEcHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHcc //