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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55416.1
DDBJ      :             putative aminopeptidase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  150/915 : Eukaryota  181/199 : Viruses  0/175   --->[See Alignment]
b.49.3c.56.5
:429 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   13->410 2ijzA PDBj 2e-69 44.6 %
:RPS:PDB   368->409 3cpxA PDBj 2e-04 14.3 %
:RPS:SCOP  6->87 1y7eA2  c.56.5.4 * 2e-15 15.7 %
:RPS:SCOP  90->208 1y7eA1  b.49.3.1 * 1e-31 17.8 %
:RPS:SCOP  220->407 1vhoA2  c.56.5.4 * 1e-04 22.3 %
:HMM:SCOP  7->427 1y7eA2 c.56.5.4 * 1.6e-94 45.8 %
:RPS:PFM   16->410 PF02127 * Peptidase_M18 1e-93 46.3 %
:HMM:PFM   16->424 PF02127 * Peptidase_M18 1.1e-136 41.7 408/432  
:BLT:SWISS 8->410 APEB_MYCLE e-148 65.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55416.1 GT:GENE BAD55416.1 GT:PRODUCT putative aminopeptidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 587087..588376 GB:FROM 587087 GB:TO 588376 GB:DIRECTION + GB:PRODUCT putative aminopeptidase GB:PROTEIN_ID BAD55416.1 LENGTH 429 SQ:AASEQ MPVATTDATAAGLCAFVDDSPSPFHVCHTVAGELEAAGFTRLSESAAWASGEPGRYYVVRGGSLVAWADRDGSPSAPFRVVGAHTDSPNLRVKQHPDLASAGWQLVGLEPYGGAWLNSWLDRELGLSGRLTVREGNSVRARLVRIDDPILRVPQLAIHLSEDRRGVSLDPQRHVNAVWGVGEKPRSFLAFVAEYAEVDPDAVLGWELMTHDLAPSRLVGRDRDLVSAPRLDNQGTCYAGLRAFLAAVAEPGTAIPVLAMFDHEEVGSQSDRGAQSDLLPAVLERIVLARGGGRAEYLAALAGSVCASGDMAHATHPNYPERHEPAHRIEVNGGPVLKVNQNLRYATDATGAGAFALACAQAEVPLQRYVHRADLPCGSTIGPMTAARTGMPTVDVGAPQLAMHSARELMGAADVGAYAAALAAFLTPDG GT:EXON 1|1-429:0| BL:SWS:NREP 1 BL:SWS:REP 8->410|APEB_MYCLE|e-148|65.8|400/426| SEG 345->361|atdatgagafalacaqa| SEG 411->423|aadvgayaaalaa| BL:PDB:NREP 1 BL:PDB:REP 13->410|2ijzA|2e-69|44.6|359/379| RP:PDB:NREP 1 RP:PDB:REP 368->409|3cpxA|2e-04|14.3|42/302| RP:PFM:NREP 1 RP:PFM:REP 16->410|PF02127|1e-93|46.3|395/427|Peptidase_M18| HM:PFM:NREP 1 HM:PFM:REP 16->424|PF02127|1.1e-136|41.7|408/432|Peptidase_M18| GO:PFM:NREP 4 GO:PFM GO:0004177|"GO:aminopeptidase activity"|PF02127|IPR001948| GO:PFM GO:0005773|"GO:vacuole"|PF02127|IPR001948| GO:PFM GO:0006508|"GO:proteolysis"|PF02127|IPR001948| GO:PFM GO:0008270|"GO:zinc ion binding"|PF02127|IPR001948| RP:SCP:NREP 3 RP:SCP:REP 6->87|1y7eA2|2e-15|15.7|80/291|c.56.5.4| RP:SCP:REP 90->208|1y7eA1|1e-31|17.8|107/113|b.49.3.1| RP:SCP:REP 220->407|1vhoA2|1e-04|22.3|148/244|c.56.5.4| HM:SCP:REP 7->427|1y7eA2|1.6e-94|45.8|295/0|c.56.5.4|1/1|Zn-dependent exopeptidases| OP:NHOMO 530 OP:NHOMOORG 331 OP:PATTERN -------------------------------------------------------------------- ----1111111-1-11111-11111111111-11111111------11111-11111------1---112--------21-1------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11222222222222-222222222121-22-----1111-11111-111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------11---1-121111---111---------------11----------------------1----------11----1-----------------------1--------------------------------------------------------------------------------------------------------1-111-------------------------1111111111111111111------------------------------------------------111111111---------------------------1--1111111--- 1111111-311-1112223222222222222222222222222222322222221222222233312223223232222223333411-11121111111111222-122222111-11-111121121AL1-321-111111111111-11-211111--1121------11111122L2221142432232211112 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 394 STR:RPRED 91.8 SQ:SECSTR ############cccccTTTHHHHHHHcccHHHHHHHHHHHccccc####ccTcccEEcTTTTccEEEEEccccTTccEEEEccccccEEEEEEEEEEEETTEEEEEEEEEcccccTTcccccEEEEEEEETTTEEEEEcccccccccccccccccGGGccccccTTTTccGGGccccccTTcccHHHcEEEcccccccccccccccTTcEEEcccccccccccccccccccccTTTTTTTHHHHTTccccccEEcEEEEccccTTTTcHHHHccccTTTcccccHccccccccHcTTTTTcccEEEEccccccccccGGGccccccccccccccccccccccccccHHHHTTTTHHHHHTccccccEEEEEccccccHHHHHHHcccccccccEEcEEccTTcTTcEEc################### DISOP:02AL 1-5, 160-169| PSIPRED ccHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHcccEEEccccccccccccEEEEEEccEEEEEEcccccccccEEEEEEEccccEEEEEcccccccccEEEEEEEEEccccccccccccccEEEEEEEEcccEEEEEEEEEcccEEEcccccHHccccccccccccccccEEEEEEccccHHHHHHHHHHHcccHHHHHHHHHHHccccccEEEcccccEEEccccHHHHHHHHHHHHHHHHHccccccEEEEEEEEccEEccccccccccccHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccccccHHHHcccccEEEcccEEEEEccccccccccHHHHHHHHHHHHccccEEEEEEEEcccccccHHHHHHHHccccEEEEccHHHHHHHHHHHHcHHHHHHHHHHHHHHHcccc //