[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55417.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  48/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:427 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   157->275 PF09594 * DUF2029 3e-15 47.0 %
:HMM:PFM   88->323 PF09594 * DUF2029 9.7e-60 49.8 229/241  
:HMM:PFM   63->93 PF06541 * DUF1113 0.00063 29.0 31/157  
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55417.1 GT:GENE BAD55417.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(588334..589617) GB:FROM 588334 GB:TO 589617 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55417.1 LENGTH 427 SQ:AASEQ MADSAEQPVATETTHPRVAGPAPESPARTRLLLAALALFAVSALVSLLAHWWHGFIDLQVYRNGARVWLDGGELYGPMPPVYGIGLPFTYPPLAALFFAPLALMPLVLAEVVVLATSLGCLGLTLWLVLARLRPGLDPRTMTTLVIAAVALALYLEPVRQTFGFGQINLVLMAAVALDCLVRKPFWPRGMLIGITVSIKLIPAGFLLYFLLRRDWKAAGTMVVSAIGAVGLGFLLFPSDSAEYWLRTLADTGRIGPPYFAGNQSLKGLAFRLGVPDSAATLIWLGLAVIAVALAALWMHRLIEAGQSVAALLVNAAAILLVSPVSWSHHWIWVAPALLVAVDAILRRRAGRRPVRLLTATVAALTVLYLIGPQWLLPHSNDRELDWAWWQQIVGSGYVLVTFAVLVVAALTYRPYPSGVRNAASAAA GT:EXON 1|1-427:0| TM:NTM 12 TM:REGION 30->52| TM:REGION 81->103| TM:REGION 110->131| TM:REGION 136->158| TM:REGION 160->181| TM:REGION 190->211| TM:REGION 220->242| TM:REGION 278->300| TM:REGION 302->324| TM:REGION 326->345| TM:REGION 354->376| TM:REGION 392->414| SEG 31->49|lllaalalfavsalvslla| SEG 91->115|pplaalffaplalmplvlaevvvla| SEG 118->129|lgclgltlwlvl| SEG 144->155|lviaavalalyl| SEG 281->297|liwlglaviavalaalw| SEG 308->321|vaallvnaaaillv| SEG 345->369|lrrragrrpvrlltatvaaltvlyl| SEG 398->411|vlvtfavlvvaalt| RP:PFM:NREP 1 RP:PFM:REP 157->275|PF09594|3e-15|47.0|117/236|DUF2029| HM:PFM:NREP 2 HM:PFM:REP 88->323|PF09594|9.7e-60|49.8|229/241|DUF2029| HM:PFM:REP 63->93|PF06541|0.00063|29.0|31/157|DUF1113| OP:NHOMO 97 OP:NHOMOORG 48 OP:PATTERN -------------------------------------------------------------------- ----421333323122222-22112122222212123334---11--2------2--1--22-12142-1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-3, 18-21, 423-427| PSIPRED ccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHEEcccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHccHHHccccccccccccccHHHHccccHHHHHHHHHHHHHHHHcccccHHHHHHHccc //