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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55430.1
DDBJ      :             putative cytochrome D ubiquinol oxidase subunit I
Swiss-Prot:             

Homologs  Archaea  7/68 : Bacteria  612/915 : Eukaryota  3/199 : Viruses  0/175   --->[See Alignment]
:499 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   6->462 PF01654 * Bac_Ubq_Cox 7e-99 49.3 %
:HMM:PFM   6->464 PF01654 * Bac_Ubq_Cox 4.1e-173 46.7 435/436  
:BLT:SWISS 1->462 CYDA_BACSU 2e-99 44.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55430.1 GT:GENE BAD55430.1 GT:PRODUCT putative cytochrome D ubiquinol oxidase subunit I GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 605399..606898 GB:FROM 605399 GB:TO 606898 GB:DIRECTION + GB:PRODUCT putative cytochrome D ubiquinol oxidase subunit I GB:PROTEIN_ID BAD55430.1 LENGTH 499 SQ:AASEQ MSVLDISRWQFGITTVYHFLFVPLTIGLAPFVAGMQTAWVITGNERWYRLTKFFGKLFLINFALGVATGIVQEFQFGMNWSEYSRFVGDVFGAPLALEALVAFFLESTFIGLWIFGWSRLPKLVHLATIWLVAIGVNASAYFIVAANSFMQHPVGARYNPERGRAELTSIWEVLTNNTTLAAFPHVIAGSFLVAGTFVAGIAGWWMVRNARSADPVRREEARTMWRPAGRAGMYVILVSMVAVVLTGDIQGKLMFEQQPMKMASAESLCHTQTDPDFSVLTVGTHNNCDSVTHLIEVPYVLPYLAEGKFEGVTLDGVKDLQQAYIEKFGPGDYRPNLFVTYWSFRAMIGLSAGSVLLVLAGLWLTRRGRVPDQRWYSWLSLLAIPTPFLANSAGWVFTEMGRQPWVVVPNPTGDPALRMTVQQGVSDHSFSTVLISLVVFTLLYGALAVVWFYLIRRYVIEGPEPAAPPKPDRPDDSGGTGRTSGAAEEPAVEQLSFAY GT:EXON 1|1-499:0| BL:SWS:NREP 1 BL:SWS:REP 1->462|CYDA_BACSU|2e-99|44.4|439/468| TM:NTM 8 TM:REGION 13->35| TM:REGION 53->75| TM:REGION 91->113| TM:REGION 125->147| TM:REGION 183->205| TM:REGION 230->252| TM:REGION 344->365| TM:REGION 434->455| SEG 93->106|aplalealvaffle| SEG 463->476|pepaappkpdrpdd| RP:PFM:NREP 1 RP:PFM:REP 6->462|PF01654|7e-99|49.3|428/432|Bac_Ubq_Cox| HM:PFM:NREP 1 HM:PFM:REP 6->464|PF01654|4.1e-173|46.7|435/436|Bac_Ubq_Cox| GO:PFM:NREP 3 GO:PFM GO:0016020|"GO:membrane"|PF01654|IPR002585| GO:PFM GO:0016491|"GO:oxidoreductase activity"|PF01654|IPR002585| GO:PFM GO:0055114|"GO:oxidation reduction"|PF01654|IPR002585| OP:NHOMO 958 OP:NHOMOORG 622 OP:PATTERN -------------------------421-1--------------------11-----1---------- 11111-11111--111111-11--1211111-11112111111111111111111-11--11111122112--------111-11-111111-111----11-1-1-1-111111111111111111-11-11-11--------2-1111---1111-------11141---------------1------12233333333233333312222233312111111111112-111111111111111111111-1-22-11-1111122-1-1111111111---------------------------------------1----------------------------2--1-11-1----11--------111111-----122111-11113111111111111-33234133211-3111-111111131-1-11111111--2222222221111-31------------11111111111111-1---12-1323133332333222255533333124542222-1112-1---11111-11--2-211----------12--1211111121111121211111122221113111-111111--1--------111-11221311211121222211221221121211--1-11-------23122322222222222-2222222222222222222332223233333333333333232222222221-211111111111---12222122221111311111111111111122222121112111212222112112111211112121-111133333122112234344333-------------------------------------------------------------11 -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------1-------------1---------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 463-491| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccEEEEEccEEEEccHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHcccccccccEEEEEEccccccEEEEEEEcccHHHEEEEcccccccccccHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHccccEEEEcccccccccEEEEccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccccccc //