[GTOP] [HELP] [ORGANISMS] [SEARCH] [SUMMARY]
Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55439.1
DDBJ      :             putative thiosulfate sulfurtransferase
Swiss-Prot:             

Homologs  Archaea  29/68 : Bacteria  467/915 : Eukaryota  154/199 : Viruses  0/175   --->[See Alignment]
c.46.1
:277 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->277 3hwiB PDBj e-136 83.0 %
:RPS:PDB   1->275 1e0cA PDBj 5e-38 23.0 %
:RPS:SCOP  6->127 1e0cA1  c.46.1.2 * 1e-32 24.0 %
:RPS:SCOP  149->277 1okgA2  c.46.1.2 * 6e-31 25.2 %
:HMM:SCOP  1->137 1uarA1 c.46.1.2 * 1.2e-36 32.1 %
:HMM:SCOP  140->278 1uarA2 c.46.1.2 * 6.1e-36 36.0 %
:RPS:PFM   13->116 PF00581 * Rhodanese 2e-05 29.2 %
:RPS:PFM   160->268 PF00581 * Rhodanese 3e-11 41.3 %
:HMM:PFM   10->118 PF00581 * Rhodanese 1e-21 29.5 105/113  
:HMM:PFM   150->266 PF00581 * Rhodanese 2.9e-24 36.0 100/113  
:BLT:SWISS 1->277 THTR_MYCTU e-141 83.4 %
:PROS 255->265|PS00683|RHODANESE_2
:REPEAT 2|37->123|188->273

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55439.1 GT:GENE BAD55439.1 GT:PRODUCT putative thiosulfate sulfurtransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(613348..614181) GB:FROM 613348 GB:TO 614181 GB:DIRECTION - GB:PRODUCT putative thiosulfate sulfurtransferase GB:PROTEIN_ID BAD55439.1 LENGTH 277 SQ:AASEQ MARSDVLVSVDWAEENLNTPGVVFVEVDEDTSAYDNGHIEGAVRLDWKNDLQDPVRRDFVNQQQFSDLLSARGISNDDEVILYGGNNNWFAAYAYWYFKLYGHNNVKLLDGGRKKWELDGRPLSTEPVNRPATQYKASAPDLSIRAFRDEVIAAIGTKNLVDVRSPDEFSGKILAPAHLPQEQSQRPGHIPGAINVPWSKAANEDGTFKSDEELTEIYKEAGLDPEKETIAYCRIGERSSHTWFVLQELLGHQNVKNYDGSWTEYGSLVGAPIELGA GT:EXON 1|1-277:0| BL:SWS:NREP 1 BL:SWS:REP 1->277|THTR_MYCTU|e-141|83.4|277/277| PROS 255->265|PS00683|RHODANESE_2|PDOC00322| NREPEAT 1 REPEAT 2|37->123|188->273| BL:PDB:NREP 1 BL:PDB:REP 3->277|3hwiB|e-136|83.0|271/271| RP:PDB:NREP 1 RP:PDB:REP 1->275|1e0cA|5e-38|23.0|256/270| RP:PFM:NREP 2 RP:PFM:REP 13->116|PF00581|2e-05|29.2|100/108|Rhodanese| RP:PFM:REP 160->268|PF00581|3e-11|41.3|92/108|Rhodanese| HM:PFM:NREP 2 HM:PFM:REP 10->118|PF00581|1e-21|29.5|105/113|Rhodanese| HM:PFM:REP 150->266|PF00581|2.9e-24|36.0|100/113|Rhodanese| RP:SCP:NREP 2 RP:SCP:REP 6->127|1e0cA1|1e-32|24.0|121/135|c.46.1.2| RP:SCP:REP 149->277|1okgA2|6e-31|25.2|123/134|c.46.1.2| HM:SCP:REP 1->137|1uarA1|1.2e-36|32.1|137/143|c.46.1.2|1/2|Rhodanese/Cell cycle control phosphatase| HM:SCP:REP 140->278|1uarA2|6.1e-36|36.0|139/0|c.46.1.2|2/2|Rhodanese/Cell cycle control phosphatase| OP:NHOMO 1057 OP:NHOMOORG 650 OP:PATTERN 11----2122222222-2111---21123332--1-----------1-6-----------------23 --2-123333322133344-432233444442322233432211212-122131222111321-3211222-----------32-122-----------1-1---1--2-------------------1-1-----22233---133113222-122------1-1-3232------------42211---1--1111111111111111111--1111111211------11-------------------------------------------------------------------------------------------11--3333322-2--1---111------------1-3------------3--1111-----113351121112111111111111-1111111-611-111111111122231111112322111222222223--11111-----------------------------11111121112111111-111111121111-11121211121111122231211-1211---------------111--21-1---------1-11-12--11---111-----------------------2---1111-1--111--111-1-111111--1-----231-------21212212222222222-22222222222222222222221111111111111111111111221---2--111111111111-------------11211-11--21--------1111111---1311212222322222222---------2122211111321111111111111------1-----------------------------------------------------21- ----11------2211111122221211111-111112111111111111111111--11111111111-111111111---1--111-1-11111---11--111-1112322212112122243171CD4-22--222211422211-2-1214123----A3-1----562-11118111211232-313-3322- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 277 STR:RPRED 100.0 SQ:SECSTR GTTcccEEcHHHHHTTTTcTTEEEEEcccHcHHHHHcccTTcEEccGGGGccTTcTTccccHHHHHHHHHHHTccTTcEEEEEcccccHHHHHHHHHHHHTTcccEEEETTHHHHHHHTTcccccccccccccccccccccTTcccHHHHHHHTTcTTEHHTTccccccHTccccTTcccccccccccccTTcEEccGGGGEEGGGTTEEcTTHHHHHHHTTTccTTcEEEEEccccHHHHHHHHHHHHTTcccEEEcccHHHHHTTcTTcccccEc DISOP:02AL 1-2, 274-275| PSIPRED cccccccccHHHHHHHHccccEEEEEccccHHHHHccccccEEEEccHHHcccccccccccHHHHHHHHHHcccccccEEEEEEcccccHHHHHHHHHHHcccccEEEEcccHHHHHHccccEEEccccccccccccccccHHHHHHHHHHHHHcccccEEEcccHHHHccccccccccccccccccccccccEEccHHHHcccccccccHHHHHHHHHHHccccccEEEEEcccHHHHHHHHHHHHHHccccccEEccccHHHHHccccccccccc //