Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55441.1
DDBJ : putative thioredoxin
Swiss-Prot:
Homologs Archaea 0/68 : Bacteria 27/915 : Eukaryota 0/199 : Viruses 0/175 --->[See Alignment]
c.47.1
:148 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB 59->116 2o7kA PDBj 4e-06 40.7 %
:RPS:PDB 58->143 3ec3A PDBj 1e-10 11.0 %
:RPS:SCOP 58->142 1senA c.47.1.1 * 1e-10 10.6 %
:HMM:SCOP 1->142 1jfuA_ c.47.1.10 * 4.3e-17 25.9 %
:RPS:PFM 59->116 PF00085 * Thioredoxin 6e-04 35.2 %
:HMM:PFM 52->139 PF00085 * Thioredoxin 8.3e-12 23.8 84/104
:BLT:SWISS 59->131 TRXH2_ARATH 7e-07 38.2 %
:PROS 56->74|PS00194|THIOREDOXIN_1
:TM
:SEG
SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55441.1
GT:GENE BAD55441.1
GT:PRODUCT putative thioredoxin
GT:DATABASE GIB00210CH01
GT:ORG nfar0
GB:ACCESSION GIB00210CH01
GB:LOCATION complement(614966..615412)
GB:FROM 614966
GB:TO 615412
GB:DIRECTION -
GB:PRODUCT putative thioredoxin
GB:PROTEIN_ID BAD55441.1
LENGTH 148
SQ:AASEQ MTEITILIVVLVLAVLIGLLIRRREGRARPAAPASTNPERAGLLAAAGVTGTGPAVLHFSAEWCGPCAAVRRVVAGVTADLAAEPHPPQDIEIDIDAEPALARELNVLSLPTTFVFDAAGRERFRISGVPKAGDLRSALAPLTAADQG
GT:EXON 1|1-148:0|
BL:SWS:NREP 1
BL:SWS:REP 59->131|TRXH2_ARATH|7e-07|38.2|68/133|
PROS 56->74|PS00194|THIOREDOXIN_1|PDOC00172|
TM:NTM 1
TM:REGION 2->21|
SEG 6->34|ilivvlvlavligllirrregrarpaapa|
SEG 41->57|agllaaagvtgtgpavl|
SEG 68->79|aavrrvvagvta|
BL:PDB:NREP 1
BL:PDB:REP 59->116|2o7kA|4e-06|40.7|54/103|
RP:PDB:NREP 1
RP:PDB:REP 58->143|3ec3A|1e-10|11.0|82/226|
RP:PFM:NREP 1
RP:PFM:REP 59->116|PF00085|6e-04|35.2|54/103|Thioredoxin|
HM:PFM:NREP 1
HM:PFM:REP 52->139|PF00085|8.3e-12|23.8|84/104|Thioredoxin|
GO:PFM:NREP 1
GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF00085|IPR013766|
RP:SCP:NREP 1
RP:SCP:REP 58->142|1senA|1e-10|10.6|85/134|c.47.1.1|
HM:SCP:REP 1->142|1jfuA_|4.3e-17|25.9|135/176|c.47.1.10|1/1|Thioredoxin-like|
OP:NHOMO 27
OP:NHOMOORG 27
OP:PATTERN -------------------------------------------------------------------- --------------11111-11111111111111111111-------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------------------
STR:NPRED 91
STR:RPRED 61.5
SQ:SECSTR #########################################################cccTTTHHHHHHHHHHHHTTGGHHHTTcTTcEEEEEETTTTHHHHHHTTccccccEEEEEcTTccEEEccccccHHHHHHHHHHHTHHccc
DISOP:02AL 23-39, 145-148|
PSIPRED cHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHcccccccEEEEEEcccEEEEEEEccccHHHHHHHHHHHcccccc
//
[GTOP]
