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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55441.1
DDBJ      :             putative thioredoxin
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  27/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.47.1
:148 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   59->116 2o7kA PDBj 4e-06 40.7 %
:RPS:PDB   58->143 3ec3A PDBj 1e-10 11.0 %
:RPS:SCOP  58->142 1senA  c.47.1.1 * 1e-10 10.6 %
:HMM:SCOP  1->142 1jfuA_ c.47.1.10 * 4.3e-17 25.9 %
:RPS:PFM   59->116 PF00085 * Thioredoxin 6e-04 35.2 %
:HMM:PFM   52->139 PF00085 * Thioredoxin 8.3e-12 23.8 84/104  
:BLT:SWISS 59->131 TRXH2_ARATH 7e-07 38.2 %
:PROS 56->74|PS00194|THIOREDOXIN_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55441.1 GT:GENE BAD55441.1 GT:PRODUCT putative thioredoxin GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(614966..615412) GB:FROM 614966 GB:TO 615412 GB:DIRECTION - GB:PRODUCT putative thioredoxin GB:PROTEIN_ID BAD55441.1 LENGTH 148 SQ:AASEQ MTEITILIVVLVLAVLIGLLIRRREGRARPAAPASTNPERAGLLAAAGVTGTGPAVLHFSAEWCGPCAAVRRVVAGVTADLAAEPHPPQDIEIDIDAEPALARELNVLSLPTTFVFDAAGRERFRISGVPKAGDLRSALAPLTAADQG GT:EXON 1|1-148:0| BL:SWS:NREP 1 BL:SWS:REP 59->131|TRXH2_ARATH|7e-07|38.2|68/133| PROS 56->74|PS00194|THIOREDOXIN_1|PDOC00172| TM:NTM 1 TM:REGION 2->21| SEG 6->34|ilivvlvlavligllirrregrarpaapa| SEG 41->57|agllaaagvtgtgpavl| SEG 68->79|aavrrvvagvta| BL:PDB:NREP 1 BL:PDB:REP 59->116|2o7kA|4e-06|40.7|54/103| RP:PDB:NREP 1 RP:PDB:REP 58->143|3ec3A|1e-10|11.0|82/226| RP:PFM:NREP 1 RP:PFM:REP 59->116|PF00085|6e-04|35.2|54/103|Thioredoxin| HM:PFM:NREP 1 HM:PFM:REP 52->139|PF00085|8.3e-12|23.8|84/104|Thioredoxin| GO:PFM:NREP 1 GO:PFM GO:0045454|"GO:cell redox homeostasis"|PF00085|IPR013766| RP:SCP:NREP 1 RP:SCP:REP 58->142|1senA|1e-10|10.6|85/134|c.47.1.1| HM:SCP:REP 1->142|1jfuA_|4.3e-17|25.9|135/176|c.47.1.10|1/1|Thioredoxin-like| OP:NHOMO 27 OP:NHOMOORG 27 OP:PATTERN -------------------------------------------------------------------- --------------11111-11111111111111111111-------------------------11-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 91 STR:RPRED 61.5 SQ:SECSTR #########################################################cccTTTHHHHHHHHHHHHTTGGHHHTTcTTcEEEEEETTTTHHHHHHTTccccccEEEEEcTTccEEEccccccHHHHHHHHHHHTHHccc DISOP:02AL 23-39, 145-148| PSIPRED cHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccHHHHHHHHcccccEEEEEEccccHHHHHHHHHHHHHHHHHHHccccEEEEEEEccccHHHHHHcccccccEEEEEEcccEEEEEEEccccHHHHHHHHHHHcccccc //