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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55455.1
DDBJ      :             putative transcriptional regulator
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  13/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.121.1a.4.1
:221 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   23->182 1ui5B PDBj 2e-09 31.0 %
:RPS:PDB   23->198 3c2bB PDBj 5e-12 15.7 %
:RPS:SCOP  23->79 1z77A1  a.4.1.9 * 5e-10 29.8 %
:RPS:SCOP  83->171 1ui5A2  a.121.1.1 * 2e-07 18.2 %
:HMM:SCOP  4->79 2fd5A1 a.4.1.9 * 7.7e-14 34.2 %
:HMM:SCOP  82->214 1ui5A2 a.121.1.1 * 1e-18 27.8 %
:HMM:PFM   15->61 PF00440 * TetR_N 1.6e-14 40.4 47/47  
:BLT:SWISS 23->197 AFRP_STRGR 6e-13 29.5 %
:PROS 27->57|PS01081|HTH_TETR_1
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55455.1 GT:GENE BAD55455.1 GT:PRODUCT putative transcriptional regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 630829..631494 GB:FROM 630829 GB:TO 631494 GB:DIRECTION + GB:PRODUCT putative transcriptional regulator GB:PROTEIN_ID BAD55455.1 LENGTH 221 SQ:AASEQ MARQQERARRTRAAIIRSAAVEFGKSGYAAASLNRILEGSRATKGAMYFHFDSKEDLARAVLETAVERYRSSAERWLARTDLGPLDVLHGMIDELALRLEHDIIVQAEYRLIIEPDFYRDVQVGGGRILTRATRSLAVRAIDHGQLREDADPDRFTRTLTAALAGQRYLVDLLGGATDLRSRFQEALEVVVASMATPEWCEKFAVDGWGASARLEELGLGL GT:EXON 1|1-221:0| BL:SWS:NREP 1 BL:SWS:REP 23->197|AFRP_STRGR|6e-13|29.5|166/276| PROS 27->57|PS01081|HTH_TETR_1|PDOC00830| SEG 2->20|arqqerarrtraaiirsaa| BL:PDB:NREP 1 BL:PDB:REP 23->182|1ui5B|2e-09|31.0|142/199| RP:PDB:NREP 1 RP:PDB:REP 23->198|3c2bB|5e-12|15.7|172/192| HM:PFM:NREP 1 HM:PFM:REP 15->61|PF00440|1.6e-14|40.4|47/47|TetR_N| RP:SCP:NREP 2 RP:SCP:REP 23->79|1z77A1|5e-10|29.8|57/75|a.4.1.9| RP:SCP:REP 83->171|1ui5A2|2e-07|18.2|88/124|a.121.1.1| HM:SCP:REP 4->79|2fd5A1|7.7e-14|34.2|76/0|a.4.1.9|1/1|Homeodomain-like| HM:SCP:REP 82->214|1ui5A2|1e-18|27.8|133/0|a.121.1.1|1/1|Tetracyclin repressor-like, C-terminal domain| OP:NHOMO 30 OP:NHOMOORG 13 OP:PATTERN -------------------------------------------------------------------- ---------------11--------1----------2685--------1-----------------1111-----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 177 STR:RPRED 80.1 SQ:SECSTR #####################HHHHHHHHHccHHHHHHHTTccHHHHHHHTccHHHHHHHHHHHHHTcccccHHHHHHHHHcHHHHHHHHHHTcHHHHHHHHHHHHHcHHcTTccHHHHHHHHHTTHHHHHHHHHHHHHHHHTTcccccccHHHHHHHHHHHHHTTHHHHHTTcccccHHHHHHHHHHHHHHHHccHH####################### DISOP:02AL 1-11| PSIPRED cccccccHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHccccHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHcccccccccccHHHHHHHcHHHHcccc //