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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55461.1
DDBJ      :             putative glycosyltransferase
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  462/915 : Eukaryota  183/199 : Viruses  2/175   --->[See Alignment]
c.68.1
:253 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   16->117 1qg8A PDBj 1e-05 28.6 %
:RPS:PDB   19->248 2bo4A PDBj 5e-25 17.1 %
:RPS:SCOP  19->247 2bo4A1  c.68.1.18 * 2e-23 17.2 %
:HMM:SCOP  16->231 1xhbA2 c.68.1.17 * 2e-43 30.0 %
:RPS:PFM   18->143 PF00535 * Glycos_transf_2 1e-12 35.2 %
:HMM:PFM   18->161 PF00535 * Glycos_transf_2 2.6e-30 29.3 140/169  
:BLT:SWISS 7->232 DPM1_MOUSE 8e-37 41.2 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55461.1 GT:GENE BAD55461.1 GT:PRODUCT putative glycosyltransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 635489..636250 GB:FROM 635489 GB:TO 636250 GB:DIRECTION + GB:PRODUCT putative glycosyltransferase GB:PROTEIN_ID BAD55461.1 LENGTH 253 SQ:AASEQ MGPRAGPGEQGGRPLRVTVVVPTYNERENLPVAVARLTALPVSDLHILVVDDNSPDGTGEVADKLAADLPDVVGVLHRTEKDGLGRAYVAGITRALDEGADVVIQMDADLSHPAEVIPAMLDKLRDTDAGVVLGSRYVPGGSTAEEWKWYRKALSAWANFYVNLILRLGVKDATAGFKAWKAETLRAIDVASIRSNGYSFQVEMNYRTVKKGITIAEVPIRFEERTKGASKMSLKVQLESALMPWKLLFGRAV GT:EXON 1|1-253:0| BL:SWS:NREP 1 BL:SWS:REP 7->232|DPM1_MOUSE|8e-37|41.2|221/260| BL:PDB:NREP 1 BL:PDB:REP 16->117|1qg8A|1e-05|28.6|98/238| RP:PDB:NREP 1 RP:PDB:REP 19->248|2bo4A|5e-25|17.1|222/380| RP:PFM:NREP 1 RP:PFM:REP 18->143|PF00535|1e-12|35.2|122/148|Glycos_transf_2| HM:PFM:NREP 1 HM:PFM:REP 18->161|PF00535|2.6e-30|29.3|140/169|Glycos_transf_2| RP:SCP:NREP 1 RP:SCP:REP 19->247|2bo4A1|2e-23|17.2|221/380|c.68.1.18| HM:SCP:REP 16->231|1xhbA2|2e-43|30.0|213/0|c.68.1.17|1/1|Nucleotide-diphospho-sugar transferases| OP:NHOMO 1220 OP:NHOMOORG 713 OP:PATTERN 1111111111111111-123222441133412134122212124417631554254244542112-22 12C1911121112121222-22113322222233332244275322111212231111114431513551112111121-2-21-122111211112--12222345321---------------2222221223176678-11731532334-11111212211-23332-211---2-12---------31------1--1-1--11-1------1211--1--11-------------------------1-------------------1--1111111111-11------1----111-111111111111111111----41-----------------1--2---3-2-22-1221-11---1---117---1-------11211111111-----------------1---1--1------11----3111----------11111111111112-2------------------------------21--2-----111111-----22-3------1212111--121--1111-111-1121------------113132242612-1-3122-154524343222422324-11--------------------112211-1---1---11111-1211-111111-1---1--1------1121-212222211111-2121111111213112113---11---1-1221123221212321-12221--111111111-11---1221221111--1------11---------111-1--1---1--1---11--------2--------------------11--211-------------42543311----------------------------------------------14- 11-1211-311111111111111111-11111111111111111111111111111111111211111-1112211111111111111-1121122111112111112212111-12--111212114-7C2-423111-2-212121112-24-1112-211121-11111132111171112121421112111112 ---------------------------------------------------1-1------------------------------------------------------------------------------------------------------------------------- STR:NPRED 238 STR:RPRED 94.1 SQ:SECSTR ###########TTEEcEEEEEEcccccHHHHHHHHHHHHHcTTTccEEEEEEccccHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHcHHccccEEEEccTTcccccHHHHHHHHHHHHTTccEEEEEccccTTccHHHHHTHHHTHHHHHHHHcTTccGGGcccTTcccEEEEHHHHHHHcHHHHTcccTTHHHHHHHHHHHTTccEEEETTcccccccccGGGGHHHHHHHHHHHHHHTc#### DISOP:02AL 1-11| PSIPRED cccccccccccccccEEEEEEEcccHHHHHHHHHHHHHHcccccEEEEEEEccccccHHHHHHHHHHHcccEEEEEEccccccHHHHHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHHHcccccEEEEEEEEEccccccccHHHHHHHHHHHHHHHHHHHccccccccccHHHccHHHHHHccccccccccccHHHHHHHHHHHccccEEEEEEEEEEcccccEEEcHHHHHHHHHHHHHHHHHHcc //