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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55471.1
DDBJ      :             putative aminotransferase
Swiss-Prot:             

Homologs  Archaea  66/68 : Bacteria  851/915 : Eukaryota  189/199 : Viruses  0/175   --->[See Alignment]
c.67.1
:392 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->380 2o0rB PDBj e-114 56.4 %
:RPS:PDB   18->380 2douA PDBj 3e-41 23.6 %
:RPS:SCOP  9->372 1vp4A  c.67.1.1 * 6e-43 20.9 %
:HMM:SCOP  1->390 1iayA_ c.67.1.4 * 1.8e-107 37.4 %
:RPS:PFM   44->330 PF00155 * Aminotran_1_2 2e-33 36.5 %
:HMM:PFM   31->385 PF00155 * Aminotran_1_2 2.3e-63 28.9 343/363  
:BLT:SWISS 10->378 YBDL_ECOLI 1e-65 36.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55471.1 GT:GENE BAD55471.1 GT:PRODUCT putative aminotransferase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 647339..648517 GB:FROM 647339 GB:TO 648517 GB:DIRECTION + GB:PRODUCT putative aminotransferase GB:PROTEIN_ID BAD55471.1 LENGTH 392 SQ:AASEQ MPSRPATVERLRPFASTIFAEMTELAVRHEAVNLGQGFPDTDGPAGMLEVARRAIADGVNQYPPGRGMPVLRRAIAADRARRYGTEYDPDTEVLVTVGATEAISAALLGLVEPGQEVVLIEPYYDSYAAAVALAGAHRRTAHLVADGDRFVLDLDSLRAAVTPRTRMLVVNSPHNPTGTVLGRADLTAIAELACEHDLLVLTDEVYEHLVYDDNEHISLATLPGMAERTIVVSSAAKTFNVTGWKIGWVCAPAYLVDAVLAAKQFLTFVGGGPFQPAVAHALTEEQEWVARMRESLSDKRIRLSAALAETGFGVRASGGGYFVCADVTPLGTADGLAFCRALPGTLGVAAVPVSVFADDTAAWNHLVRFTFCKQDRTLDEGVRRLRAGARVG GT:EXON 1|1-392:0| BL:SWS:NREP 1 BL:SWS:REP 10->378|YBDL_ECOLI|1e-65|36.6|366/386| SEG 72->82|rraiaadrarr| SEG 128->141|aaavalagahrrta| SEG 381->391|gvrrlragarv| BL:PDB:NREP 1 BL:PDB:REP 6->380|2o0rB|e-114|56.4|374/383| RP:PDB:NREP 1 RP:PDB:REP 18->380|2douA|3e-41|23.6|352/372| RP:PFM:NREP 1 RP:PFM:REP 44->330|PF00155|2e-33|36.5|282/341|Aminotran_1_2| HM:PFM:NREP 1 HM:PFM:REP 31->385|PF00155|2.3e-63|28.9|343/363|Aminotran_1_2| GO:PFM:NREP 3 GO:PFM GO:0009058|"GO:biosynthetic process"|PF00155|IPR004839| GO:PFM GO:0016769|"GO:transferase activity, transferring nitrogenous groups"|PF00155|IPR004839| GO:PFM GO:0030170|"GO:pyridoxal phosphate binding"|PF00155|IPR004839| RP:SCP:NREP 1 RP:SCP:REP 9->372|1vp4A|6e-43|20.9|358/420|c.67.1.1| HM:SCP:REP 1->390|1iayA_|1.8e-107|37.4|382/428|c.67.1.4|1/1|PLP-dependent transferases| OP:NHOMO 4554 OP:NHOMOORG 1106 OP:PATTERN 22323113222222225512232453344474212333334336644545555-33354451223-23 6793653644425445533-352254323334566669A64445565624428A8445113451768677658997663237243433467545--11242434563433-111111--------33343323224655343335554444443322222222343565561311111311112444411284777777778677777737665777768855445555556622222222222222122232633357391429977781725845544443233455444444444442222222222222454766555536374888887848437554333335-21545354355213453343223633444411111438576656565555555555458-55A55A688C41966A88A7886967252477888897A5555555575545656111111111111111111111111111112158235C947B9A99AA566677BD65666688A67771366B656657767D6345444424222222255447517741547375666-55552354477576548332222222222222122223342444223362114111322211111221112212---4544------55673664444455444-4454444443434444443686651123334243333343443643444441-555565566666--1111111433366445221113-2122122144444342436366769A8C587764665433324323433432222222221333545533412222263223322--------1---------------------------4333324222345 ----225-421-23322323563656533232233324444443332235356543222333333112221231311-1114332411-38322431112412433-38433636552332233C41A3CJ4-6462433633A32333143343434521245442522244355555n55626ABEM3I54897A88 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 380 STR:RPRED 96.9 SQ:SECSTR cccccGGGHHHHTccccHHHHHHHHHHHHHHEEcccccccccccHHHHHHHHHHTTcGGcccccHHHHHHHHHHHHHHHHHHHcccccTTTcEEEEccHHHHHHHHHHHHccTTcEEEEEccccHHHHHHHHHTTcEEEEEcccTTccTTcccGGGccHHHHHHEEEEEEccccTTTcccccHHHHHHHHHHHHHTTcEEEEEcTTGGGcccccccccGGGcTTGGGTEEEEEEHHHHHTcGGGccEEEEEcHHHHHHHHHHHHHHcccccHHHHHHHHHHHTccHHHHHHHHHHHHHHHHHHHHHHTTTcEEcccccccEEEEEccTTcccccHHHHHHHHHHHTTEEcEEGGGGcGGGTTEHTEEEEEccccHHHHHH############ DISOP:02AL 1-5, 8-11| PSIPRED ccccccHHHHcccccHHHHHHHHHHHcccccEEcccccccccccHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccccccEEEEccHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHccEEEEEEcccccccccccHHHHHHHHccccEEEEEccccccccccccHHHHHHHHHHHHHcccEEEEEccccHHcccccccccHHHcccccccEEEEEEcHHHHccHHHHEEEEEccHHHHHHHHHHHHHHcccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccEEEcccccEEEEEEccccccccHHHHHHHHHHHccEEEEEcccccccccccccEEEEEEcccHHHHHHHHHHHHHHHccc //