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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55486.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  41/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
f.38.1
:597 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  125->554 1pw4A_ f.38.1.1 * 4.7e-22 20.6 %
:HMM:PFM   163->520 PF07690 * MFS_1 6.8e-19 21.0 334/353  
:BLT:SWISS 85->573 Y2143_MYCLE e-110 52.4 %
:PROS 442->458|PS00606|B_KETOACYL_SYNTHASE
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55486.1 GT:GENE BAD55486.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(661571..663364) GB:FROM 661571 GB:TO 663364 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55486.1 LENGTH 597 SQ:AASEQ MTTPRDPYGPERGPWDDEEAPPIERHPGYDRYPPPNAPTRRRRPLPPLDPDRYTAPPPLRPLGKRGGPPEHDPGTRGSTSRVDKPVRRTSPQLPPPTAAVDEQAETGPGAPRMPRKLTVTRVAAMRSRQLTEKGIATFQRAAKADGADKSGLTALTYATMANFALDAAIAVALANTLFFASATAESKSKVALYLLITIAPFAVIAPLIGPLLDRLQRGRRLALATSFAVRAVLAVVLILEFDTWALYPLALCMMIGSKSFSVLKSAVTPRVLPPEIDLVRTNSRLTVFGLVGGTMGAGAVAALVAALAGSTGALVLAGLIAAGGAYLSLRIPRWVEVTEGEVPATLTYRGDDTRTEVLAPGAESAVPPRKRRQPLGRAVVSGLWGNGTIRVLTGFLTFYVAFVAKATEHRPLQQATMLGVVGAAAAIGNFTGNATGARIPLGRPSVIVIGCTSACAAVALFAVFTDNLLGAAVAALVAAAASALAKVSLDASIQDDLPPESIASGFGRSETVLQLSWVIGGAAGVLLPTDYWKGFAVVSGILVLGLIQTFLSYRGHSLLPGLGGNRPQHAEQEVPAAHTARGQTTTTRPATGDPIRE GT:EXON 1|1-597:0| BL:SWS:NREP 1 BL:SWS:REP 85->573|Y2143_MYCLE|e-110|52.4|487/579| PROS 442->458|PS00606|B_KETOACYL_SYNTHASE|PDOC00529| TM:NTM 9 TM:REGION 156->178| TM:REGION 190->212| TM:REGION 227->249| TM:REGION 295->317| TM:REGION 387->409| TM:REGION 413->434| TM:REGION 442->464| TM:REGION 471->493| TM:REGION 521->543| SEG 31->54|rypppnaptrrrrplppldpdryt| SEG 56->69|ppplrplgkrggpp| SEG 161->175|anfaldaaiavalan| SEG 228->239|avravlavvlil| SEG 289->329|glvggtmgagavaalvaalagstgalvlagliaaggaylsl| SEG 471->492|aavaalvaaaasalakvsldas| HM:PFM:NREP 1 HM:PFM:REP 163->520|PF07690|6.8e-19|21.0|334/353|MFS_1| HM:SCP:REP 125->554|1pw4A_|4.7e-22|20.6|413/447|f.38.1.1|1/1|MFS general substrate transporter| OP:NHOMO 41 OP:NHOMOORG 41 OP:PATTERN -------------------------------------------------------------------- ---11-------1-11111-111111111111111111111111----------------111-111111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 31-91, 95-110, 356-373, 591-597| PSIPRED cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEEHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEcccccccccHHHHHHHHccHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEccEEEEEEHHHHHHHHHHHHHHHHHHHcccccEEEEEEEEcccEEEEEEccccEEcccccccEEEEEcccccHHHHHccHHHHccccccccccccHHHHHHHHHccHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEccccEEEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEccccccHHccccccccccccccccccc //