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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55488.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  60/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:378 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   35->224 PF11228 * DUF3027 4e-41 49.5 %
:HMM:PFM   35->224 PF11228 * DUF3027 1.6e-85 60.0 190/194  
:BLT:SWISS 31->245 Y901_MYCBO 5e-64 52.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55488.1 GT:GENE BAD55488.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 664233..665369 GB:FROM 664233 GB:TO 665369 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55488.1 LENGTH 378 SQ:AASEQ MSAVSVSEPDVRPVLADAVDLARRALVELEPDAVGAYLGVTAEDETAATHRFEATLPGYRGWQWAVVVAAPPGAAHATVSESALLPGPEALVAPEFVPWEQRIRPGDLAPGDLLAPPADDPRLVPGYVANGDPEIDELAREVGLGRTKVMSLEGRLEAAERWYAEHGPDTEMAKAAPATCGTCGFYLPLAGSLRAAFGVCGNAMGADGHVVHVEYGCGAHSDVELPTGDGSPRYEAYDDAAVDVIPVEELRGDAGESGGAQAPEGRAGVNAVVSSEPADAASTTAAPAPVESGDAAASGDTTAAGTSARVGEVAATADSESEASAPEGDSGDVAADAAPGEEAAAPADPVDEDSAPRIARGGEAPGAVRPEASSSAQS GT:EXON 1|1-378:0| BL:SWS:NREP 1 BL:SWS:REP 31->245|Y901_MYCBO|5e-64|52.6|215/262| SEG 14->27|vladavdlarralv| SEG 65->79|avvvaappgaahatv| SEG 105->121|pgdlapgdllappaddp| SEG 274->289|ssepadaasttaapap| SEG 292->308|sgdaaasgdttaagtsa| SEG 312->353|evaatadseseasapegdsgdvaadaapgeeaaapadpvded| RP:PFM:NREP 1 RP:PFM:REP 35->224|PF11228|4e-41|49.5|190/193|DUF3027| HM:PFM:NREP 1 HM:PFM:REP 35->224|PF11228|1.6e-85|60.0|190/194|DUF3027| OP:NHOMO 60 OP:NHOMOORG 60 OP:PATTERN -------------------------------------------------------------------- ----111----1-111111-111111111111111111111111111-1---111--1--111111111111111111--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-8, 220-237, 248-378| PSIPRED cccccccccccHHHHHHHHHHHHHHHHHHccccccccEEEEEccccEEEEEEEccccccccEEEEEEEEEcccccEEEEEEEEEEcccccccccccccHHHcccccccccccccccccccccccccccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHcccccccHHcccccccccccEEEEEccccHHHHHccHHHcccccccEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc //