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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55489.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  15/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
d.122.1
:947 amino acids
:PSIPRED
:DISOPRED
:HMM:SCOP  1->140 1byqA_ d.122.1.1 * 5.7e-10 23.6 %
:RPS:PFM   268->378 PF02547 * Queuosine_synth 5e-04 35.5 %
:HMM:PFM   30->116 PF02518 * HATPase_c 2.4e-05 20.2 84/111  
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55489.1 GT:GENE BAD55489.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 665414..668257 GB:FROM 665414 GB:TO 668257 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55489.1 LENGTH 947 SQ:AASEQ MLAAWRDSPTRLREDAATEADLVRAGYRDRLLTELAQNAADAAARAGVPGTEWVRIDGADLHIANTGAPLDLSGVHALTALRASGKTGTAVGRFGVGFTAVRSVSDEIEVRSRHGGLHFSLDRTRAALRESGITATITAPPVLRLAWPAATPPAPDADTEVVLRLRPGVDAAALLSAMRGEAVDLLLELPDLREIRIGTDRFTVRSAPVAWPGDRDGAGGIEDVRIAGPEGESRWWQFRTRRARWLLPVRDGRPVPAAPDVLRAPTRSDEELSLPALLIADIPMQPDRRRLLPGARVRELAEGYADFARALPELDRLVLVPAPGFARSEADSLIREALLHELRTHAWLPVLGVPETARSRNGEEVLPSGGFAPDLVDRGITGPEPGPDGSPRSGRHGVAVPTRASVLPGLTADLASVLGELTGPLVLPELSTPRYLEQLAVLDVHRLGLARLAELSAGLERSPSWWREFYAALEPFVVDPLAAEELGALAVPLADGRLVTGPRTVLLDDQLAEVVPLHWARLVHPEAAHPLLSRLGARSATAADLLTDPALRAELEDRPDDEDTVDAVLRLAPHVAPEARPGWLGMLELPDDSGGTLPADELLLPDAPLRDLLVADAPFGTVAPAMVEAYGAEALRAVGVGWDFTLVTETDPTGPDHHLDDEETWWASLDEDPPTLVAVRDLDLIDDRAWPRALRLLAADPRTRPLLADPRGYTPWWLRRHAHLDGVPLGHHRHPADPEFTGLLPDFPAAGFDPAELAALRPVLADPEALDLDLAEALLAALADPDRSPEPGVVAAAHRRLAAAVHAGRLEVSDLEPPERVRALSGAAVDPADAMVLDAPWFGLAVAPNRLVAGAADTADSLAALLDLPLVSEAVTAEVLGEGRRTTWAAEPLAVVLRETLTAPADGDLVLHEELRVRLDGAVRGTVEVPWWRTGTTTHVRAPEPLG GT:EXON 1|1-947:0| SEG 36->46|aqnaadaaara| SEG 148->159|paatppapdadt| SEG 540->553|ataadlltdpalra| SEG 597->618|lpadelllpdaplrdllvadap| SEG 686->708|ddrawpralrllaadprtrplla| SEG 764->786|ladpealdldlaeallaaladpd| SEG 792->810|gvvaaahrrlaaavhagrl| SEG 853->870|agaadtadslaalldlpl| RP:PFM:NREP 1 RP:PFM:REP 268->378|PF02547|5e-04|35.5|107/217|Queuosine_synth| HM:PFM:NREP 1 HM:PFM:REP 30->116|PF02518|2.4e-05|20.2|84/111|HATPase_c| GO:PFM:NREP 3 GO:PFM GO:0008616|"GO:queuosine biosynthetic process"|PF02547|IPR003699| GO:PFM GO:0016740|"GO:transferase activity"|PF02547|IPR003699| GO:PFM GO:0016853|"GO:isomerase activity"|PF02547|IPR003699| HM:SCP:REP 1->140|1byqA_|5.7e-10|23.6|140/213|d.122.1.1|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 15 OP:NHOMOORG 15 OP:PATTERN -------------------------------------------------------------------- ----1-------------------------------1111-11---------------------1111111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-2, 945-947| PSIPRED ccccccccHHHHHHccccHHHHHHcccHHHHHHHHHHHHHHHHHHcccccEEEEEEEccEEEEEcccccccHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccEEEEEccccEEEcHHHHHHHHHccccccccccccEEEcccccccccccccccEEEEEEcccHHHHHHHHHHccccEEEEEEccccEEEEEccccEEEEEEEEEccccccccccEEEEEEEcccccccEEEEEEcEEEEEEEEccccccccccccccccccccccccccEEEEEEcccccccHHccccHHHHHHHHHHHHHHHHcccccccEEEccccccHHHHHHHHHHHHHHHcccEEEcccccccccccccccccccccccccHHHHHHccccccccccccccccccccccccccHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHEEcccHHHHHHHHHcccccHHHHHHHHHHHcccccccccHHHccccccccccccEEEcccEEEcccccHHHHHHHHHHHcccHHccHHHHHHccccccHHHHHccHHHHHHHHccccHHHHHHHHHHHHHccccccccccEEEEEcccccccccccccEEccccHHHHHHHccccccEEcHHHHHHccccHHHHHHHHEEEEEEEccccccccccccccccccccccccccEEEEEEcHHHHHccccHHHHHHHcccccEEEEccccccccccEEccccccccccHHHccccccHHHcccccccccccccHHHHHHHccccccHHHcccccHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHcccHHHcccHHHHEEEcccEEEcccEEEEcccHHHHHcccccEEEEccccHHHHHHHHHHHHHHHHHHEEEccccccccccHHHHHEEEEccccccccccEEEEccHHEEEcccEEcEEEccEEccccEEEEccccccc //