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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55505.1
DDBJ      :             putative pyridoxamine 5'-phosphate oxidase
Swiss-Prot:PDXH_NOCFA   RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase;         EC=1.4.3.5;AltName: Full=PNP/PMP oxidase;         Short=PNPOx;AltName: Full=Pyridoxal 5'-phosphate synthase;

Homologs  Archaea  0/68 : Bacteria  480/915 : Eukaryota  158/199 : Viruses  0/175   --->[See Alignment]
b.45.1
:274 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   94->274 2a2jA PDBj 4e-59 64.7 %
:RPS:PDB   65->274 2a2jA PDBj 2e-41 61.0 %
:RPS:SCOP  86->274 1wv4A  b.45.1.1 * 2e-40 40.3 %
:HMM:SCOP  74->274 2a2jA1 b.45.1.1 * 6.6e-57 48.7 %
:RPS:PFM   234->274 PF10590 * PNPOx_C 3e-07 61.0 %
:HMM:PFM   234->274 PF10590 * PNPOx_C 1.1e-17 56.1 41/42  
:HMM:PFM   95->179 PF01243 * Pyridox_oxidase 6.5e-17 39.0 82/89  
:BLT:SWISS 61->274 PDXH_NOCFA e-125 100.0 %
:PROS 244->257|PS01064|PYRIDOX_OXIDASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55505.1 GT:GENE BAD55505.1 GT:PRODUCT putative pyridoxamine 5'-phosphate oxidase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(680889..681713) GB:FROM 680889 GB:TO 681713 GB:DIRECTION - GB:PRODUCT putative pyridoxamine 5'-phosphate oxidase GB:PROTEIN_ID BAD55505.1 LENGTH 274 SQ:AASEQ MFRRAHADHQNLIPLLPRSNVSPMRDLDNSAPRADRPASEAEHRAALRRVAADLAAMRVDYGGVPSGSGEDVDLDEAWLAGGWEPLLRNWIEQATAVDIAEPNAMVLATVAVVDGVPRPASRTVLCKGLSPEGVTFYTNYDSAKGTQLAAVPYAAATFVWPVLGRQVHLRGPVERTSAEQTAVYWRSRPRDSQLGAWASQQSRPIDSRAALDRALAEVTARFAGVDEIPVPPHWGGYLLRPEQVEFWQGRRGRLHNRLLVRVAGERMTVERLQP GT:EXON 1|1-274:0| SW:ID PDXH_NOCFA SW:DE RecName: Full=Pyridoxine/pyridoxamine 5'-phosphate oxidase; EC=1.4.3.5;AltName: Full=PNP/PMP oxidase; Short=PNPOx;AltName: Full=Pyridoxal 5'-phosphate synthase; SW:GN Name=pdxH; OrderedLocusNames=NFA_6600; SW:KW Complete proteome; Flavoprotein; FMN; Oxidoreductase;Pyridoxine biosynthesis. SW:EXACT F SW:FUNC + BL:SWS:NREP 1 BL:SWS:REP 61->274|PDXH_NOCFA|e-125|100.0|214/225| GO:SWS:NREP 3 GO:SWS GO:0016491|"GO:oxidoreductase activity"|Oxidoreductase| GO:SWS GO:0055114|"GO:oxidation reduction"|Oxidoreductase| GO:SWS GO:0008615|"GO:pyridoxine biosynthetic process"|Pyridoxine biosynthesis| PROS 244->257|PS01064|PYRIDOX_OXIDASE|PDOC00815| SEG 44->60|raalrrvaadlaamrvd| BL:PDB:NREP 1 BL:PDB:REP 94->274|2a2jA|4e-59|64.7|173/202| RP:PDB:NREP 1 RP:PDB:REP 65->274|2a2jA|2e-41|61.0|200/202| RP:PFM:NREP 1 RP:PFM:REP 234->274|PF10590|3e-07|61.0|41/42|PNPOx_C| HM:PFM:NREP 2 HM:PFM:REP 234->274|PF10590|1.1e-17|56.1|41/42|PNPOx_C| HM:PFM:REP 95->179|PF01243|6.5e-17|39.0|82/89|Pyridox_oxidase| GO:PFM:NREP 2 GO:PFM GO:0016638|"GO:oxidoreductase activity, acting on the CH-NH2 group of donors"|PF10590|IPR019576| GO:PFM GO:0055114|"GO:oxidation reduction"|PF10590|IPR019576| RP:SCP:NREP 1 RP:SCP:REP 86->274|1wv4A|2e-40|40.3|139/162|b.45.1.1| HM:SCP:REP 74->274|2a2jA1|6.6e-57|48.7|193/0|b.45.1.1|1/1|FMN-binding split barrel| OP:NHOMO 702 OP:NHOMOORG 638 OP:PATTERN -------------------------------------------------------------------- ----1---------21111-1111111111111111131111112212-11--1---1--111-1112221-----------1-----111--111---11111111111------------------------1-1--11----11111111----------111-111--1-----1----111-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1-1111111111111111111111111111111111-11111111111111111111111111111112111111111111111111111111111111111---------------1-111111111111111111121111111111111121111111111211111111111111----111111111------1-----------------------111111--1------------------------111111111111111111211111111111111-1-11-------11111111111111111-11111111111111111111112111111111111111111111111111111111111111111111-111111211-111111111111111----1-111111111133331111111111111---------2111111111111111111121111111111--111111----------------------------------------------121 ----111-----221111111122121-1-11111111-1-1-1111111221211111111111111-1111111111111111111-13111111111111----1-2212121111111111-111281-11211112-111-111-11-11--1132-1211131212121111-----111132111------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 210 STR:RPRED 76.6 SQ:SECSTR ################################################################cTTTcccccGGGGGGTTHHHHHHHHHHHHHHHTTcccTTEEEEEEEETTTTEEEEEEEEEEEEEEETTEEEEEEETTcHHHHHHHHccEEEEEEEEGGGTEEEEEEEEEEEccHHHHHHHHHHccHHHHHHHHHccTTccccccHHHHHHHHHHHHHHTTcccccccTTEEEEEEcccEEEEEEccTTcccEEEEEEcTTcTTEEEEccT DISOP:02AL 1-50| PSIPRED ccccccccccccccccccccccHHHHHHHccccccccccccccccccccccccHHHHHHHHccccccccccccccHHHccccHHHHHHHHHHHHHHcccccccEEEEEEEccccccccccEEEEEEEEEccccEEEEEccccHHHHHHHHcccEEEEEEEHHHcEEEEEEEEEEEccHHHHHHHHHHcccccccEEEEcccccccccHHHHHHHHHHHHHHcccccccccccccEEEEEEEEEEEEEEccccccEEEEEEEEEcccEEEEEEcc //