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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55506.1
DDBJ      :             putative citrate synthase
Swiss-Prot:             

Homologs  Archaea  36/68 : Bacteria  696/915 : Eukaryota  44/199 : Viruses  0/175   --->[See Alignment]
a.103.1
:382 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   21->369 2c6xA PDBj 3e-42 33.6 %
:RPS:PDB   18->374 1aj8A PDBj 6e-78 27.2 %
:RPS:SCOP  21->369 1a59A  a.103.1.1 * 4e-73 30.3 %
:HMM:SCOP  18->376 1aj8A_ a.103.1.1 * 1.3e-92 37.9 %
:RPS:PFM   24->358 PF00285 * Citrate_synt 6e-48 38.7 %
:HMM:PFM   21->71 PF00285 * Citrate_synt 4.8e-12 52.0 50/356  
:HMM:PFM   115->358 PF00285 * Citrate_synt 1.1e-74 38.0 234/356  
:BLT:SWISS 14->379 CISY2_MYCTU e-174 80.3 %
:PROS 257->269|PS00480|CITRATE_SYNTHASE
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55506.1 GT:GENE BAD55506.1 GT:PRODUCT putative citrate synthase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 681767..682915 GB:FROM 681767 GB:TO 682915 GB:DIRECTION + GB:PRODUCT putative citrate synthase GB:PROTEIN_ID BAD55506.1 LENGTH 382 SQ:AASEQ MTTSPAVPGGQATVPSDFVSGLEGVVAFTTDIAEPDKDGGALRYRGVDIEDLVGSRVTFGDVWALLVDGEFGHGLPPAEPFPLPVHTGDVRVDVQAGLAMLAPIWGYQPLLDIDDQTARENLARASVMALSYVAQSARGIYQPAVPQKKIDECNTVTERFMTRWKGDPDPRHIEAIDAYWVSAAEHGMNASTFTARVIASTGADVAASLSGAIGAMSGPLHGGAPARVLPMIEEVEKTGDARALVKGILDRKEKLMGFGHRVYRAEDPRARVLRATAQRLGAPRYEVAAALEQAALAELRERRPDRAIETNVEFWAAVILDFAEVPAHMMPAMFTCGRTAGWCAHILEQKQLGKLVRPAAIYTGPGPRKPAEVAGWSDISHL GT:EXON 1|1-382:0| BL:SWS:NREP 1 BL:SWS:REP 14->379|CISY2_MYCTU|e-174|80.3|366/373| PROS 257->269|PS00480|CITRATE_SYNTHASE|PDOC00422| SEG 288->303|aaaleqaalaelrerr| BL:PDB:NREP 1 BL:PDB:REP 21->369|2c6xA|3e-42|33.6|339/363| RP:PDB:NREP 1 RP:PDB:REP 18->374|1aj8A|6e-78|27.2|345/371| RP:PFM:NREP 1 RP:PFM:REP 24->358|PF00285|6e-48|38.7|323/347|Citrate_synt| HM:PFM:NREP 2 HM:PFM:REP 21->71|PF00285|4.8e-12|52.0|50/356|Citrate_synt| HM:PFM:REP 115->358|PF00285|1.1e-74|38.0|234/356|Citrate_synt| GO:PFM:NREP 2 GO:PFM GO:0044262|"GO:cellular carbohydrate metabolic process"|PF00285|IPR002020| GO:PFM GO:0046912|"GO:transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer"|PF00285|IPR002020| RP:SCP:NREP 1 RP:SCP:REP 21->369|1a59A|4e-73|30.3|337/377|a.103.1.1| HM:SCP:REP 18->376|1aj8A_|1.3e-92|37.9|348/371|a.103.1.1|1/1|Citrate synthase| OP:NHOMO 1265 OP:NHOMOORG 776 OP:PATTERN 11----2111111112-122211111111211------------------111--1-----221--11 1131221233321232333-32113333333322222363232224211221322223--222222343411111111-1114-1111111--1-----111111-1111---------------1111111111111111---42211111111111111111111111111111111111111111---21322222222222222232332322211112111111112211111111111111111111-----------------------1-1-------111------------------------111111111----------------1-111---1-11--32--111------1------11-1222211111213331122211111111111112-11111112133124412213231111131212111111122222222211111221111111111--11111111111111111111211222232333222222222642222-223635321133211122321123224112122222222211211121322-1--21----------1------23-22111111111-12111111111--111221221222232222222222222222222---2222------21111112222222222-2212222222222221222222222312222222222222222111111111-111111111111--1222222222212222-----1-----11112221222222212222222222222222211111111111113222222222222222222221111111-221111-------------------------------------1---1-111111 ----33------333-1--111-2122--------------------1--1111-----------------------------------1111111----11-----1-2-----------------------------------------------------------------3-22S111-12122-33------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 373 STR:RPRED 97.6 SQ:SECSTR #HHHTTcccccccHHHHccGGGTTccccccccEEEETTTTEEEETTEEHHHHHHcHccHHHHHHHHHHcccTccccHHHHccTTccHHHHHHHHHHHHHHHcTcccccccHTTTccccHHHHHHHHHHHHHHHHHHHHHHHHHHTTcccccTTccHHHHHHHHHHccccHHHHHHHHHHHHHHccccccHHHHHHHHHHTTTccHHHHHHHHHHHHHcTTTTTHHHHHHHHHHHHccGGGHHHHHHHHHHHTcccTTccccccccccHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHTTTTTccccTTTTHHHHHHTTTccGGGHHHHHHHHHHHHHHHHHHHHHTTccccccccccccccccccccGG######## DISOP:02AL 1-3| PSIPRED cccccccccccccEEEEEccccccccEEEEEEEEEEccccEEEEccccHHHHccccccHHHHHHHHHHcccccccHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHcccccHHHHHHHHHHHHHHccccccHHHHHHHHHHHccccHHHHHHHHHHHHcccccccHHHHHHHHHHHHcccccHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHccccEEccEEEEEcccccccEEEEccccHHcc //