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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55507.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  4/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:388 amino acids
:PSIPRED
:DISOPRED
:HMM:PFM   165->244 PF11932 * DUF3450 0.00059 20.0 80/252  
:BLT:SWISS 27->148 MUC19_HUMAN 8e-04 34.0 %
:TM
:COIL
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55507.1 GT:GENE BAD55507.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(682946..684112) GB:FROM 682946 GB:TO 684112 GB:DIRECTION - GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55507.1 LENGTH 388 SQ:AASEQ MSRLRARWAVLVVGILAAGAVGAVACTRTDPPPTGIALVDTDTGPTGARIAQSLTKDGGGYDWTVVEPGAASTADYAAVITLPADLTTAMGSLAGPQPQRAKLTVATHEDADPHLVDGATAVLTKRIGATGVDAALTAVAQARTQLTGVQLTAQLLGAGVQVAAAGADQFNAGAEQMLGFLDFAKSGAAQLTSAIELLNSTVAGATAQAEQLAAALDSTGVTIAQVEQSAQAVGSGLDQILPLLRGLPFAGDPALADIIGKLEGLRALAGQAGSQLTGIGTLVGGSVDPDTDLGTLLRTVVDRLTAASAQLTQGAELAADLPQLAEQGGAQLIDAMGQLTGGVEQLQTIVTNLGTQTGKAMDALPVRSSAQQSAIASALTDPVEIVRE GT:EXON 1|1-388:0| BL:SWS:NREP 1 BL:SWS:REP 27->148|MUC19_HUMAN|8e-04|34.0|106/100| COIL:NAA 30 COIL:NSEG 1 COIL:REGION 189->218| TM:NTM 1 TM:REGION 7->26| SEG 9->25|avlvvgilaagavgava| SEG 153->174|aqllgagvqvaaagadqfnaga| SEG 203->216|agataqaeqlaaal| SEG 368->378|ssaqqsaiasa| HM:PFM:NREP 1 HM:PFM:REP 165->244|PF11932|0.00059|20.0|80/252|DUF3450| OP:NHOMO 4 OP:NHOMOORG 4 OP:PATTERN -------------------------------------------------------------------- ------------------------------------1111----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-5, 89-101, 150-159, 187-217, 229-234, 237-238, 258-294, 321-342, 350-379, 384-388| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHccccccccccEEEEEccccccHHHHHHHHHHccccccEEEEcHHHHccccEEEEEEEcHHHHHHHHHHccccccccEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHcc //