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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55509.1
DDBJ      :             putative two-component system response regulator
Swiss-Prot:             

Homologs  Archaea  9/68 : Bacteria  850/915 : Eukaryota  25/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:238 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   27->235 1ys6B PDBj 2e-65 65.2 %
:RPS:PDB   27->231 3c3wB PDBj 2e-24 20.9 %
:RPS:SCOP  29->122 1a0oA  c.23.1.1 * 5e-19 35.1 %
:RPS:SCOP  141->236 1gxpA  a.4.6.1 * 1e-22 25.0 %
:HMM:SCOP  7->201 1s8nA_ c.23.1.1 * 6e-37 32.8 %
:RPS:PFM   33->122 PF00072 * Response_reg 6e-17 45.6 %
:RPS:PFM   159->234 PF00486 * Trans_reg_C 1e-12 47.4 %
:HMM:PFM   159->234 PF00486 * Trans_reg_C 4e-28 55.3 76/77  
:HMM:PFM   12->122 PF00072 * Response_reg 3.5e-27 36.0 111/112  
:BLT:SWISS 27->235 PRRA_MYCTU 5e-65 65.2 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55509.1 GT:GENE BAD55509.1 GT:PRODUCT putative two-component system response regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(685615..686331) GB:FROM 685615 GB:TO 686331 GB:DIRECTION - GB:PRODUCT putative two-component system response regulator GB:PROTEIN_ID BAD55509.1 LENGTH 238 SQ:AASEQ MGGVSTSPTPTVLVVDDDEDVLASVERGLRLSGFHVLVARDGAAALRSVNADCPDAVVLDMNMPVLDGAGVVTALRALGNDVPICVLSARASVDDRISGLESGADDYLVKPFVLAELVARIKALLRRRTDAPAAAATPGAITVGPLEVDEAGYRALLHGREIELTKREFELLSTLARNAGVVLSRERLLELVWGYDFAADTNVVDVFVGYLRRKLEADGTPRLLHTIRGVGFVLRAPK GT:EXON 1|1-238:0| BL:SWS:NREP 1 BL:SWS:REP 27->235|PRRA_MYCTU|5e-65|65.2|207/233| SEG 4->26|vstsptptvlvvdddedvlasve| SEG 123->140|allrrrtdapaaaatpga| SEG 181->192|vvlsrerllelv| BL:PDB:NREP 1 BL:PDB:REP 27->235|1ys6B|2e-65|65.2|207/227| RP:PDB:NREP 1 RP:PDB:REP 27->231|3c3wB|2e-24|20.9|187/210| RP:PFM:NREP 2 RP:PFM:REP 33->122|PF00072|6e-17|45.6|90/111|Response_reg| RP:PFM:REP 159->234|PF00486|1e-12|47.4|76/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 159->234|PF00486|4e-28|55.3|76/77|Trans_reg_C| HM:PFM:REP 12->122|PF00072|3.5e-27|36.0|111/112|Response_reg| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 29->122|1a0oA|5e-19|35.1|94/128|c.23.1.1| RP:SCP:REP 141->236|1gxpA|1e-22|25.0|96/103|a.4.6.1| HM:SCP:REP 7->201|1s8nA_|6e-37|32.8|186/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 9784 OP:NHOMOORG 884 OP:PATTERN -----------------------------1--------11------12-3111--------------- 8FJ6P466778655CBBAA-AI44BCAAAAA9IFGH9FHGCDCFC9676998BDB45711IGL6P7HPNN8444465557GA71346699KD-922---44D467M4G8C--------------232222233241MMMRQF6BT5dLUSKKBDEBC8689AAGICEYZfC484554574544CE65523-B5ETTUTUQTUHUSWUTQFHBAABTVa8ADU7DC999A9AaT7998A897999999967885B675AA655466666BA655565575DED765788888888888888455555555555576466455565QIKZNNNROQSQOIEVVV7CEAMGE8BBGL83aTIA8534637685128E87HFFB55666GBNMKFACFJEHL9989999988D-FHFFHIHJAJ91QLLLIHKPPKGGCM7B9BADIEHI9B9AAAAAAAA8AA99MG91111111122222333223223223222226BG55ADCAFPQTSUNLHHHDNNTSIGJIBHUPQJLOT11HLMNAKDBUIHKN6GNFA89AE71211111752DKN7JF832F45MA88B-OGJLFLJ88CCCDKQ6B953644443331222222229946C88HGADFCG8IBBFFJJG9HEHGGIGHEHKGJ--24746------DCBDBC8EEDFEEFGEE-EGFEEEEEEGEEEEEEEEDFDF9C777DCDDDDDDCCDCDCDDFDCADDEE71ACCCCCCCCCCC--1A333334444BALAH312322133332--3CB9AC7B899FCRORRNVVYHNRRRHMLP32121321249BCIBBBBBCFIFGNNFCHCDDDD6646--91443355211-11-11-2-------------------------37433454445F3 ----11--------2----1--1-------------------------11-------1------------------------------------1-111--1-2-2----------------------------------------------------2----2-1-------3-112-------1--A-----8---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 212 STR:RPRED 89.1 SQ:SECSTR ##########################HHHHTcTTEEEEEccHHHHHHHHHHHcccEEEEccEETTEEHHHHHHHHHHHcTTcEEEEGGGcccHHHHHHHHHHTcccHHHHHHHHHHHHHHHHHHHHHGGGccHHHHHHHHHHHHHHHHcHHHHHHHHHcTTTTccHHHHHHHHHHTTTccccccHHHHHHHHHHHHHTccHHHHHHHHHHHHHHTTcccccHHHHHHHHHTccccccc DISOP:02AL 1-8, 128-140| PSIPRED ccccccccccEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHcccccEEEEEcccccccHHHHHHHHHHccccccEEEEEccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHHccccccccccccEEEEccEEEEcccEEEEEccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEEHHHHHHHHHHcccccccEEEEEEccEEEEEccc //