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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55511.1
DDBJ      :             putative acyl-CoA synthetase
Swiss-Prot:             

Homologs  Archaea  52/68 : Bacteria  750/915 : Eukaryota  196/199 : Viruses  0/175   --->[See Alignment]
e.23.1
:666 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   6->635 2p20A PDBj e-132 43.1 %
:RPS:PDB   47->610 3c5eA PDBj 3e-71 22.4 %
:RPS:SCOP  7->633 1pg3A  e.23.1.1 * 3e-77 38.1 %
:HMM:SCOP  5->638 1pg4A_ e.23.1.1 * 1.6e-174 36.9 %
:RPS:PFM   6->78 PF11930 * DUF3448 4e-13 43.8 %
:RPS:PFM   89->538 PF00501 * AMP-binding 4e-48 42.2 %
:HMM:PFM   89->539 PF00501 * AMP-binding 4e-106 33.0 415/418  
:HMM:PFM   4->79 PF11930 * DUF3448 1.6e-27 40.8 76/82  
:BLT:SWISS 7->633 Y3568_PSEAE 0.0 52.9 %
:PROS 245->256|PS00455|AMP_BINDING
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55511.1 GT:GENE BAD55511.1 GT:PRODUCT putative acyl-CoA synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(686897..688897) GB:FROM 686897 GB:TO 688897 GB:DIRECTION - GB:PRODUCT putative acyl-CoA synthetase GB:PROTEIN_ID BAD55511.1 LENGTH 666 SQ:AASEQ MNAKHEYRPVYQTSLVDPAEFWTTAAEAIDWDVPPTQIVDPAAKPAARWFPDAQLNTSVNALDRHLPERADQPALIYDSAMTGAKGVYTYAQLLDEVATFAGAMQRLGVARGDRVVIYLPMIPEAVIAMLACARIGAVHSVVFGGFAAPELAARIDDAEPVLIVTAAGGLEPNRKIEYPPIVARALGLAQTAAPRHVIVKQRPVHFSPDFPPAETAAQWLDWDDAVRDAPKAEPVPVAATDPLYILYTSGTTGKPKGVVRDNGGHAVALAWSMRNIYDVGPGQVMWAASDVGWVVGHSYIVYAPLLVGATTLLYEGKPVGTPDAGAFWRIVAEYRVRVLFTAPTALRAIRKADGEAKLARNHDLSSLRALFCAGERLDPATYEWARGTLLAERPDCPVVDHWWQTETGWPICANLLGLQELPVKPGSASVPVPGYRLRVLDAEGNPVPAGTEGNIVIGLPMPPGTLTGLWHDDTRFARSYMSAFPGHYATGDSGYFDEDGYLFVLGRSDDVINMAGHRLSAGSIEAAISGHAAVAECAVIGLPDELKGQKPIAYVVLKEGVEVDPATLRDELIARVRDQVGAIAALHDAVIVAGLPKTRSGKILRKTIRQISAGEQVEVPSTIEDPAVLAALEDQILTTRADAAEAAGEAPDTDGALGASDPAARP GT:EXON 1|1-666:0| BL:SWS:NREP 1 BL:SWS:REP 7->633|Y3568_PSEAE|0.0|52.9|616/628| PROS 245->256|PS00455|AMP_BINDING|PDOC00427| TM:NTM 1 TM:REGION 121->143| SEG 638->656|ttradaaeaageapdtdga| BL:PDB:NREP 1 BL:PDB:REP 6->635|2p20A|e-132|43.1|612/641| RP:PDB:NREP 1 RP:PDB:REP 47->610|3c5eA|3e-71|22.4|523/536| RP:PFM:NREP 2 RP:PFM:REP 6->78|PF11930|4e-13|43.8|73/85|DUF3448| RP:PFM:REP 89->538|PF00501|4e-48|42.2|393/405|AMP-binding| HM:PFM:NREP 2 HM:PFM:REP 89->539|PF00501|4e-106|33.0|415/418|AMP-binding| HM:PFM:REP 4->79|PF11930|1.6e-27|40.8|76/82|DUF3448| GO:PFM:NREP 2 GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| RP:SCP:NREP 1 RP:SCP:REP 7->633|1pg3A|3e-77|38.1|611/634|e.23.1.1| HM:SCP:REP 5->638|1pg4A_|1.6e-174|36.9|618/643|e.23.1.1|1/1|Acetyl-CoA synthetase-like| OP:NHOMO 9169 OP:NHOMOORG 998 OP:PATTERN 54-2--9FHFHHGHFC2175753HC55432792241--3222-7566954333----1---456---3 2488U663445C4AWsXLL-Kc66fiLLLLLJbfkfd***4cCX4116286-C7E99B--MHG2YJdRLZA--------295H213211211-1--1--215112B2323--------------133234223343BBBEF222V874D4CDA11111113111115GAO311111112112166688--2DALDDEDEGCECEBFFIB58DDEIDEFBKEDD46233323S3133434434433344322221-1-22-2---121122-111231111111111122111-1111111111111111-1111--111---21---41111311-1-G-22------51-81-51C83261--B41111---721FAAG1111176YQd647TRWNO46674465657-BBHDBKCCAJM-A66D799A8DB8EJ786DAK7B88DDI33333333C3212D98-----------1-----------------2DGZF-6KJAFGLMOONJIKKFEDKQYYYWDRUCYYhoZ35IIE9DFCBSCHJXP33C1121B52222222224IA94fMD6567576555-5774623444564bK991221-111111111-11-111222411681685655645544467755556375588--12963------C5E7645777B7CC976-678777979979977677664954JM58677888888778778735455651-576777555575---433343456459L49111111-111-1112888985A799D5KQKLSNKLCHJKG9GEN13222333322338677778647766644443332222--2-222222--------1-------------------------------------27- 1111VU5-A51-67BMOJGJKIFMLJQDDCDCDEDCGICJGJJEDED8GHKKOPDFGDADBBA2232232332223333332222222-GK9O98C444362CIHE16C8MDH9D8DA4555A7NH6J8T*E1IDK9889C76B776765B73H7EB8HEFPBaCPGJCUP9COF2366c44496KKKsDRM54ICECA ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 633 STR:RPRED 95.0 SQ:SECSTR ####GGTGGGcccEEEcTTccTTTcHHHHTTccTTcTTcEEcEETTccccccccccHHHHHHHHHTTcccccEEEEEEcccccEEEEEEHHHHHHHHHHHHHHHTTTcccTTcEEEEEccccHHHHHHHHHHHHHTcEEEEccTTccHHHHHHHHHHHTccEEEEETTTHHHHHHHGGGcTTccEEEEEcccccTTccccHHHHcccTTcccccccEEEEHHHHHHHcccccccccccTTcEEEEEEcccccccccEEEEEHHHHHHHHHHHHTTTTcccTTcEEEEcccTTcHHHHHHTTHHHHHHTcEEEEEccccHHHccHHHHHHHHHHccccEEEEcHHHHHHHHTccTccTcTTTcccTTccEEEEEcccccHHHHHHHHHHTHHHHHccccEEEEEETTTEEEEEccTTccHHTcccTTcccEEcTTccEEEEcTTcccccTTccEEEEEEccccTccTTcccEETTcHHHHHHTEETTEEEEEEEEEEcTTccEEEEEEGGGcEEETTEEEcHHHHHHHHHTcTTEEEEEEEEEEETTTEEEEEEEEEEcGGGTTcHHHHHHHHHHHHHHHccGGGcccEEEEEccccccTTccccHHHHHHHHHHHHTcEEEEEEEEETTEEEEEEEE############################# DISOP:02AL 1-2, 663-666| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHccccccccccccccccccHHHHHHHHHHHHccccEEEEEccccccccEEEEHHHHHHHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHHccEEEEccccccHHHHHHHHHHcccEEEEEEHHHHccHHHHHHHHHHHHHHHHcccccccEEEEEEccccccccccccccccccccHHHHHcccccccccccccccEEEEEEccccccccccEEEcHHHHHHHHHHHHHHHHccccccEEEEEccHHHHHHHHHHHHHHHHcccEEEEEcccccccccHHHHHHHHHHccccEEEccHHHHHHHHHcccccccHHHccccEEEEEEEccccccHHHHHHHHHHHHHHccccEEEEccccHHHcccEEEcccccccccccccEEcccccccEEEEEcccccccccccEEEEEEEcccccHHHHHccccHHHHHHHHHcccccEEEEccEEEEccccEEEEEEcEEcEEEEccEEEcHHHHHHHHHHcccEEEEEEEcccccccccEEEEEEEEcccccccHHHHHHHHHHHHHHHccccccccEEEEEcccccccccccHHHHHHHHHcccccccccccccHHHHHHHHHHHHHHHHcccccccccccccEEEEcccccccc //