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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55516.1
DDBJ      :             putative acetyl-CoA carboxylase beta subunit
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  731/915 : Eukaryota  11/199 : Viruses  0/175   --->[See Alignment]
c.14.1
:518 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->219 2f9iD PDBj 2e-25 31.3 %
:BLT:PDB   266->468 2f9yA PDBj 2e-18 35.0 %
:RPS:PDB   2->396 3buzA PDBj 7e-35 8.1 %
:RPS:SCOP  33->218 2f9yB1  c.14.1.4 * 9e-29 32.8 %
:RPS:SCOP  297->497 1on3A2  c.14.1.4 * 2e-22 20.1 %
:HMM:SCOP  1->220 2f9yB1 c.14.1.4 * 2.8e-51 38.6 %
:HMM:SCOP  266->516 2f9yA1 c.14.1.4 * 7e-46 32.9 %
:RPS:PFM   2->463 PF01039 * Carboxyl_trans 9e-18 30.8 %
:HMM:PFM   33->504 PF01039 * Carboxyl_trans 7.8e-55 24.5 445/493  
:BLT:SWISS 2->517 ACCD_MYCTU e-129 55.8 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55516.1 GT:GENE BAD55516.1 GT:PRODUCT putative acetyl-CoA carboxylase beta subunit GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 694420..695976 GB:FROM 694420 GB:TO 695976 GB:DIRECTION + GB:PRODUCT putative acetyl-CoA carboxylase beta subunit GB:PROTEIN_ID BAD55516.1 LENGTH 518 SQ:AASEQ MRISARELVGQLLDAESFVSWDRPPVTVAASPRYRDELRAAADAAGTDEAVLTGEGLLRGRRVAVIACEFGFLAGSIGVAAAERIVAAVERATELGLPLLASPTSGGTRMQEGTIAFVQMVKIAGAVAAHKAAGHPYLVYLRNPTMGGVFASWGSLGHMTFAEPGAMIGFLGPRVYQALYGKDFPEGVQTAENLYRHGVIDGVLPVRVFRRIAHRALSVCSGVVLPDQPAPPPVVGPPTAAEQATADGDSADTPGPEAATAGSPTWQSVLISRRPDRPGVRELLRHVTQRVPLSGTGQGESDRTTLLALARFRGQPCVVFGHDRAGRRGEQTMGPAALREARRGMALAQELRLPLVSVIDTVGAALSKEAEERGLAPEIARCIADLVTLDTPTVSVLLGQGTGGGALALLPADRVLAATHAWLAPLPPEGASAIVHRDTAHAPELADAQRIGAADLYADGVVDRIVPERPDAADEPVDFARRMVAAVADELARLRAQPADERRRTRHLRYRRLGSPRP GT:EXON 1|1-518:0| BL:SWS:NREP 1 BL:SWS:REP 2->517|ACCD_MYCTU|e-129|55.8|491/495| SEG 40->45|aaadaa| SEG 79->92|vaaaerivaavera| SEG 121->135|vkiagavaahkaagh| SEG 223->238|vvlpdqpapppvvgpp| SEG 397->410|llgqgtgggalall| SEG 502->512|rrrtrhlryrr| BL:PDB:NREP 2 BL:PDB:REP 3->219|2f9iD|2e-25|31.3|217/255| BL:PDB:REP 266->468|2f9yA|2e-18|35.0|203/301| RP:PDB:NREP 1 RP:PDB:REP 2->396|3buzA|7e-35|8.1|370/413| RP:PFM:NREP 1 RP:PFM:REP 2->463|PF01039|9e-18|30.8|416/454|Carboxyl_trans| HM:PFM:NREP 1 HM:PFM:REP 33->504|PF01039|7.8e-55|24.5|445/493|Carboxyl_trans| GO:PFM:NREP 1 GO:PFM GO:0016874|"GO:ligase activity"|PF01039|IPR000022| RP:SCP:NREP 2 RP:SCP:REP 33->218|2f9yB1|9e-29|32.8|186/257|c.14.1.4| RP:SCP:REP 297->497|1on3A2|2e-22|20.1|199/264|c.14.1.4| HM:SCP:REP 1->220|2f9yB1|2.8e-51|38.6|220/0|c.14.1.4|1/2|ClpP/crotonase| HM:SCP:REP 266->516|2f9yA1|7e-46|32.9|249/0|c.14.1.4|2/2|ClpP/crotonase| OP:NHOMO 1462 OP:NHOMOORG 743 OP:PATTERN ----------------1--------------------------------------------------- 222-1-11111-1---111-11--1211111111111422-111---1-111-11-----111--221-1---------112222222--------2--222222222222222222222222223233332332322244---3322222222222221222222222222222222222222222222-222222222322222222222232223222422222222232222222222222222222221-222222-2-33222122222222222222222222222222222222222222222222222222222--22222222222222222222221----41222222222121-----22222222222222222222222222222222222222-2222222222222222222222222222222222222222222222222222222-----------------------------22222222222222222222222222222213222222222222222222222222222222222232222222222----11---------222222222222222--2222222222222222222211222222222222222--------------------2-22222------22222222222222222-222222222222222222222222223222222222222222222222222222222222222222222222222222222222222222222122222222222222222222222222222222222222222222222222223322322222222222222222---------------2-2-------------------------------1---22- -----------1--------------------------------------------------------------------------------------------------------------------------------------------------2----------------222-----11---3-22------1 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 515 STR:RPRED 99.4 SQ:SECSTR THccHHHHHHHHHHHHTHHHHHHHHHcGGGccHHHHHTcHHHHHHHHHHHHHHHccccccEEEEEEcGGGGTcccccccTTcccccHHHHHHHHHHccEEEEEEEccEEEEEEEEEEccccccTTccccccEEEEEEEcTcEEEEETTEEEEEEEEEEEEEEEEEEEEEETTEEEEEEEEEEEcccccTTcHHHHHHHHHHHHTTHHHHccTTTHHHHTTTTccccTTTTcccccccccGGGccHHHHTTcTTTcccTTTHHHHHHHHHHHTTccccccEEEEEEEccGGGTcccccGGGcTETcHHHHHHHHHHHTTcEEEEcTccEEEEccccccGGGTTccEEEEHHEEEcTTccEEEGGGccccccccEEEEcEEEEEEEEEEETTEEEEEEEEEEEEHHHHHHTTcccEEEEcTTcEEEcccHHHHHHHHTccHHHHHHHHHHHTcccHHHHHTTcccEEccGGTGHHHHHHHHHHHTTTcccccccccccccHHHHHHHHHHHHHTccc### DISOP:02AL 516-518| PSIPRED ccccHHHHHHHHccccccccccccHHHHccccccHHHHHHHHHcccccccEEEEEEEEccEEEEEEEEcccccccccccHHHHHHHHHHHHHHHccccEEEEEcccccccccHHHHHHHHHHHHHHHHHHHHccccEEEEEccccccHHHHHHHHccEEEEEEcccEEEEEcHHHHHHHHcccccHHHccHHHHHHccEEEEEEEcHHHHHHHHHHHHHHHcccccccccccccccccccccccccccccHHcccccccccccccccEEEEEEccccccHHHHHHHHHcccHHHcccccccccEEEEEEEEEccEEEEEEEEccccccccccccHHHHHHHHHHHHHHHHccccEEEEEccccccccHHHHHHHHHHHHHHHHHHHHHccccEEEEEEcccccccccEEccccEEEEEcccEEEEEcHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHccccc //