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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55520.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  288/915 : Eukaryota  145/199 : Viruses  0/175   --->[See Alignment]
d.157.1
:381 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   150->331 3bv6B PDBj 6e-09 30.9 %
:RPS:PDB   77->373 3bv6B PDBj 3e-20 18.8 %
:RPS:SCOP  101->352 2i7xA1  d.157.1.10 * 7e-14 10.0 %
:HMM:SCOP  103->352 1e5dA2 d.157.1.3 * 1.4e-30 25.5 %
:HMM:PFM   106->167 PF00753 * Lactamase_B 2.2e-05 27.8 54/194  
:BLT:SWISS 26->377 Y930_MYCBO e-108 56.5 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55520.1 GT:GENE BAD55520.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 698808..699953 GB:FROM 698808 GB:TO 699953 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55520.1 LENGTH 381 SQ:AASEQ MMRVGKPLLLAATAAGAAWAVRAAWGIPSALGASMSTIRPSARSLANYRGGRFHNTEPSVQFEAGSVAALLVSAWTKRKAGHPRGPIPVVRPETPAEPGDLAVTWYGHATTLVEVDGYRVLTDPVWSERVSPSTLVGPARLHPVPQPLSALPELDAVLISHDHYDHLDKETVRALLAGQSAPFVVPVGIGAHLRHWGVPEDRIVELGWGASVSMQALGRARDGGDLVLTCTEARHFSGRGLVRNTTLWASWSIVGPTRRVYFGGDTGYTKAFAEAGAALGPFDLTLLPIGAYDEHWTDVHMNPEEAVRAHADLCVGDAGHGMLVPIHWATFNLAFHGWSEPVRRMVSAARAAGTRVAVPKPGQRVLPAGAAEPDPWWENVG GT:EXON 1|1-381:0| BL:SWS:NREP 1 BL:SWS:REP 26->377|Y930_MYCBO|e-108|56.5|340/372| SEG 11->24|aataagaawavraa| BL:PDB:NREP 1 BL:PDB:REP 150->331|3bv6B|6e-09|30.9|175/354| RP:PDB:NREP 1 RP:PDB:REP 77->373|3bv6B|3e-20|18.8|282/354| HM:PFM:NREP 1 HM:PFM:REP 106->167|PF00753|2.2e-05|27.8|54/194|Lactamase_B| RP:SCP:NREP 1 RP:SCP:REP 101->352|2i7xA1|7e-14|10.0|229/499|d.157.1.10| HM:SCP:REP 103->352|1e5dA2|1.4e-30|25.5|216/0|d.157.1.3|1/1|Metallo-hydrolase/oxidoreductase| OP:NHOMO 567 OP:NHOMOORG 441 OP:PATTERN -----1------------11111---------------------------21---------------- 212-----------11111-11--1111111111111112--------------1-----12--111231------------1--1--121--1-----1-2-1-321-1--------------1-------------------11---------------------------------------------111222222211222221-211--322111--12------12--------------------------------------------------------------------------------------------1-2-------1-1------------------11---------------2-----------11211---11112------------11111111-11-11111111111111---------------------1-11--11-------------111--21---------1---------11111111----1111------112---1----2--1--1---1--1-----1--------------22-11-1---1----11---1-1-11115311-1---1111---1-----------1----41--1111-1-1---1-111-1--1--1--1----------1112-11-------------------------------1111-------------------1---------111111111111--------------13-1---112-------1-22222-1--11111121111--1---1111-111111---11111111211111111111---2111--1-221111----------------------------------------------12- 22--22--31--112222111111211---------1111111---1111111111122122111111111111111111111111---3-121114343114222-1-2-121113-11-11132111761-1111-111111211111111111111----2--------431111-----11--1-2-1121---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 341 STR:RPRED 89.5 SQ:SECSTR ######################################cccccEEEcccccccccTTcccccHcGGGGGGTTcHHHHHccTTTTHHHHHHHHcccccTTcEEEEEEETTEEEEEETTccEEEEccccccHHcccccccccccccccccGGcccccEEEcccccGGGccHHHHHHHHccTTcEEEEcHHHHHHHHHHTccGGGEEEccTTEEEEEEEcccHHHHTcccTTcccccGGGGGcEEEHHHHcEEEEEEETTEEEEEcTTccccTTHHHHHHHHccccEEEEEcccccTTcccccccHHHHHHHHHTccHHHHTccEEEEEcTTccGGGcccTHHHHHHHHHTHHHHTTTTTcccEEccccTTcEEEEcccccH## DISOP:02AL 1-4, 34-45| PSIPRED ccccccHHHHHHHHHHHHHHHccccccHHHcccccccccccHHHcccccccEEEcccccccccccHHHHHHHHHHcccccccccccccccccccccccccEEEEEEEEEEEEEEEccEEEEEccEEcccccccccccccccccccccHHHcccccEEEEEccccccccHHHHHHHHcccccEEEEcccHHHHHHHccccHHHEEEEccccEEEEcccccEEccccEEEEEEccccccccccccccEEEEEEEEEEcccEEEEEccccccHHHHHHHHHcccccEEEEcccccccccccEEccHHHHHHHHHHHHHHHccccEEEEEEccccccccccccHHHHHHHHHHHccccEEEEcccccEEEEcccccccccccccc //