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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55527.1
DDBJ      :             putative phosphodiesterase
Swiss-Prot:             

Homologs  Archaea  6/68 : Bacteria  295/915 : Eukaryota  1/199 : Viruses  0/175   --->[See Alignment]
d.159.1e.5.1
:495 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->205 2hypA PDBj 2e-29 37.2 %
:RPS:PDB   4->269 2dxnA PDBj 5e-23 22.6 %
:RPS:SCOP  2->205 2hy1A1  d.159.1.11 * 9e-45 34.7 %
:HMM:SCOP  2->248 1uteA_ d.159.1.1 * 1.2e-37 26.9 %
:HMM:SCOP  230->491 1u5uA_ e.5.1.2 * 0.00083 18.2 %
:HMM:PFM   4->187 PF00149 * Metallophos 8.4e-15 17.7 181/200  
:HMM:PFM   187->240 PF02286 * Dehydratase_LU 0.00059 35.2 54/554  
:BLT:SWISS 2->205 ICC_ECOLI 5e-15 30.7 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55527.1 GT:GENE BAD55527.1 GT:PRODUCT putative phosphodiesterase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(707151..708638) GB:FROM 707151 GB:TO 708638 GB:DIRECTION - GB:PRODUCT putative phosphodiesterase GB:PROTEIN_ID BAD55527.1 LENGTH 495 SQ:AASEQ MILVAQVSDTHFDLGARNNERVERVMAFLADLAHRPDAILVTGDVTESGKPEQYAEARVALQADIPVWAIPGNHDERAAFRTELLGEQPSDSPINHVHRVGALTVIMLDTTIPGEPGGRIEEDTYRWLREVLADAPATGPIVLAMHHPPARLHSPIVDDIALAEPDRLADVVAADPRIRAVLTGHAHSAAATTFAGRPLLIAPSTASVLGGAWEVELPHRVMDYAPDPAVALHVFDESGAMTTHFRTVPMGGFLGVAPVWAVAFGPAPTGHPADMTQPFRQIFAGAARLRHARVFHPNGLRLSGRLHAEPEFESLFGTGERAVLARLSKGVGTPAGLPDVLGLALRVLDRDEQPFDLALATTGGGRLTRFVVTPARGWRSARYGSLLPYRFGSDAPVWLFAEPDAAQPESPALADLAAHLRERPATFVLSARGFTGPPRRVAEVTLHPADAGDYRTDFFDPMANHPDEVRMLPEVVGRVRELAYSGSREGRGEPS GT:EXON 1|1-495:0| BL:SWS:NREP 1 BL:SWS:REP 2->205|ICC_ECOLI|5e-15|30.7|199/275| BL:PDB:NREP 1 BL:PDB:REP 3->205|2hypA|2e-29|37.2|199/230| RP:PDB:NREP 1 RP:PDB:REP 4->269|2dxnA|5e-23|22.6|257/271| HM:PFM:NREP 2 HM:PFM:REP 4->187|PF00149|8.4e-15|17.7|181/200|Metallophos| HM:PFM:REP 187->240|PF02286|0.00059|35.2|54/554|Dehydratase_LU| RP:SCP:NREP 1 RP:SCP:REP 2->205|2hy1A1|9e-45|34.7|199/227|d.159.1.11| HM:SCP:REP 2->248|1uteA_|1.2e-37|26.9|238/302|d.159.1.1|1/1|Metallo-dependent phosphatases| HM:SCP:REP 230->491|1u5uA_|0.00083|18.2|258/0|e.5.1.2|1/1|Heme-dependent catalase-like| OP:NHOMO 350 OP:NHOMOORG 302 OP:PATTERN ---------------------------1-------------------------1-1-11-1------- ----1----------1111-111111111111-1112222-31-1-1--221221-------2-111111----------------------------------------------------------------------------2--1---11111-1-1-1-1-11--------------1------------------------------------------------2-----------------------------------------------------------------------------------------------------------------------------------------------1----------111---3223------------------1---2---22----11---21----1-----112111111112----111-------------------------------111-222221222211111111111111111111-11--112--1--1---1-------------------------------1-----1--------------------------------------------111-11----11111111111111111111---11-1------122111-1111111111-1111111111111111111222221111111111111111111111111111-11111-111111---1---------11-1-11111111111111111111111-1111111-112111111233-------------111111--111--------------11--------------------------------------------------------- -------------------------------------------------------------------------------------------------------------------------------------------------------------------1----------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 285 STR:RPRED 57.6 SQ:SECSTR ccHEEEEccccccTTccHHHHHHHHHHHHTTccccccEEEEcccccccccHHHHHHHHHHHHTcccEEEcccTTccHHHHGGGcGGGcccTTcccEEEcccccEEEEcccccTTcccccccHHHHHHHHHHHHTTTTccEEEEEcccccccccTTTcTTccTTTHHHHHHHHHHcTTEEEEEEcccccccEEEETTEEEEEcccccccccccccccccccccccccccEEEEEEEETTEEEEEEEEcTT#GcccccccccccHHHHcccGTTccccTTEEEccccT################################################################################################################################################################################################################# DISOP:02AL 484-495| PSIPRED cEEEEEEEEEcccccccHHHHHHHHHHHHHHHcccccEEEEEccccccccHHHHHHHHHHHHccccEEEEEcccccHHHHHHHHHHcccccccccEEEEcccEEEEEEcccccccccccccHHHHHHHHHHHHHccccccEEEEEEccccccccccccccccccHHHHHHHHHHccccEEEEEccccHHHHEEEccEEEEEEccccEEccccccccccccEEcccccccEEEEEEEcccEEEEEEEEEEccccccccHHHHHHccccccccccHHHHHHHHHHHHHHHHcccEEEccccEEEccEEEEcccHHHcccccHHHHHHHHHHccccccccHHHHHEEEEEEcccccccEEEEEEccccEEEEEEEEccccccccHHHEEccEEEcccccEEEEEcccccccccHHHHHHHHHHHHcccEEEEEcccccccHHHEEEEEEEccccccccccccccccccccccEEcHHHHHHHHHHHHccccccccccc //