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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55534.1
DDBJ      :             putative phosphodiesterase
Swiss-Prot:             

Homologs  Archaea  8/68 : Bacteria  286/915 : Eukaryota  36/199 : Viruses  0/175   --->[See Alignment]
d.159.1
:401 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   183->291 3c8gD PDBj 5e-14 10.1 %
:RPS:SCOP  183->349 1su1A  d.159.1.7 * 2e-12 10.4 %
:HMM:SCOP  182->398 1ii7A_ d.159.1.4 * 9.5e-36 34.0 %
:HMM:PFM   182->343 PF00149 * Metallophos 9.8e-18 26.7 161/200  
:HMM:PFM   127->152 PF08802 * CytB6-F_Fe-S 0.00044 46.2 26/39  
:BLT:SWISS 158->401 TMPPE_DANRE 8e-47 41.4 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55534.1 GT:GENE BAD55534.1 GT:PRODUCT putative phosphodiesterase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(714944..716149) GB:FROM 714944 GB:TO 716149 GB:DIRECTION - GB:PRODUCT putative phosphodiesterase GB:PROTEIN_ID BAD55534.1 LENGTH 401 SQ:AASEQ MGRVVALLVIAVLVAILGLAHWYVWRRLVRDTTAAGSVGRRVGTGVVVVGGVFLVGTLATRADFVPFAVVRVVSTVGYLWAAVFVYLLLGVLVGEVLRPVLVRLPFGRGRVEPAAPAPEAPNPSTTVPTLSRRLFVNRALAGATALAAVATVAGGTHNVLNGPAVNHVRIPIRRLSPEAAGFRITLVSDLHLGPVLDADFARKVVDTVNGTEPDLIAIAGDLVDGTVADLRTYTAPIADLRAPQGVFFCMGNHEYYSAPDEWIEHLPSLGVRVLLNQRAELPWFDIAGVDDIEGEAYDRGPDFDATLGGRDPARPCVLLAHQPVLVHDAVDYDVDLVLSGHTHGGQIFPGNLLARLANPTVAGLERYGDTQLYVTRGAGAWGPPVRVAAPSDITVLELVPA GT:EXON 1|1-401:0| BL:SWS:NREP 1 BL:SWS:REP 158->401|TMPPE_DANRE|8e-47|41.4|244/437| TM:NTM 3 TM:REGION 2->24| TM:REGION 42->64| TM:REGION 75->97| SEG 4->20|vvallviavlvailgla| SEG 38->58|vgrrvgtgvvvvggvflvgtl| SEG 83->106|vfvylllgvlvgevlrpvlvrlpf| SEG 112->121|epaapapeap| SEG 139->156|alagatalaavatvaggt| RP:PDB:NREP 1 RP:PDB:REP 183->291|3c8gD|5e-14|10.1|109/153| HM:PFM:NREP 2 HM:PFM:REP 182->343|PF00149|9.8e-18|26.7|161/200|Metallophos| HM:PFM:REP 127->152|PF08802|0.00044|46.2|26/39|CytB6-F_Fe-S| RP:SCP:NREP 1 RP:SCP:REP 183->349|1su1A|2e-12|10.4|163/184|d.159.1.7| HM:SCP:REP 182->398|1ii7A_|9.5e-36|34.0|215/333|d.159.1.4|1/1|Metallo-dependent phosphatases| OP:NHOMO 483 OP:NHOMOORG 330 OP:PATTERN ------------------1--11---------211-----------------2-----------1--- 111------------------2---1------11112222--------------------21--211112-------------1--112232-2112--111111211-2-1111111-1-------1--------11111---6-1111111-------------12221------------21-----11122232344433434441133233352232211------221-------------------2----------------------1-1---------------------------------------------2211-------1-12122----2-3--2-21-22-1-1------1---2111----------21----------------------32132322----1--211111111---1--------------------22--1-------------------------------------111-11111111111111111111-11111111--11----111-1-1----------------------12111-1-2--1----11112-121122155222111111111112111111111--1------1-----2----------------------1----------------1---1-------11----------111111---11--------------------11----1---------------------------1-2--111111-----1---------1-2------------------11------------------------11--------------1111--22----------------------------------------------1-4 -----1-----------------------------------------------------------------------------------------------------1-------11--1--1-1111-251---1111---1---1111--11--11-22111-------3321-------------------1---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 219 STR:RPRED 54.6 SQ:SECSTR ################################################################################################################################################################################cccccEHHHHHHHHHHcccHHHHHHHHHHHHHHTTGGGGcccccHHHHHHTHHHHcTTcTTccHHHHHHHHHHTTcHHHHHHHHHHHHHHHHHHHTcccccTTcHHHTTcHHHHTEEEEEEEEccTTcHHHHHHccccEEEEEEEcccHHHHHHcTTccEEEEEcccTTccEEEcccccccccccTTccHHHHHHHHHHcccccccccccccEEEEEEE###### DISOP:02AL 8-20,400-402| PSIPRED ccHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccEEEEEEEccHHHHHHHHHHHccccEEEEEccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEEEEcccccccccccEEEEEEEEcccccccHHHHHHHHHHHHHccccEEEEEccccccccccHHHHHHHHHHccccccEEEEcccccccccHHHHHHHHHHcccEEEcccEEEEcEEEEEEEccccccccccHHHHHHHHccccccccEEEEEcccccHHHHHccccEEEEEEEccccEEEcccHHccccccEEEEEEEEccEEEEEEcccccccccEEEcccccEEEEEEEEc //