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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55538.1
DDBJ      :             putative two-component system response regulator
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  839/915 : Eukaryota  8/199 : Viruses  0/175   --->[See Alignment]
a.4.6c.23.1
:231 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   3->218 2oqrA PDBj 2e-21 31.2 %
:RPS:PDB   1->103 1dc7A PDBj 1e-14 25.2 %
:RPS:PDB   124->218 2d1vA PDBj 1e-18 28.4 %
:RPS:SCOP  1->103 1a0oA  c.23.1.1 * 2e-15 25.2 %
:RPS:SCOP  122->219 1gxpA  a.4.6.1 * 6e-23 29.6 %
:HMM:SCOP  1->187 1s8nA_ c.23.1.1 * 4.3e-32 29.6 %
:RPS:PFM   3->103 PF00072 * Response_reg 6e-09 34.7 %
:RPS:PFM   145->217 PF00486 * Trans_reg_C 3e-09 46.6 %
:HMM:PFM   3->112 PF00072 * Response_reg 2e-22 34.5 110/112  
:HMM:PFM   145->217 PF00486 * Trans_reg_C 2.5e-21 49.3 73/77  
:BLT:SWISS 1->217 CUTR_STRLI 1e-50 47.9 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55538.1 GT:GENE BAD55538.1 GT:PRODUCT putative two-component system response regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 720547..721242 GB:FROM 720547 GB:TO 721242 GB:DIRECTION + GB:PRODUCT putative two-component system response regulator GB:PROTEIN_ID BAD55538.1 LENGTH 231 SQ:AASEQ MRVLVVEDEPYLAEAIRDGLRLEAIAADIAGDGDTAMELLSINKYDIAVLDRDIPGPSGDKIAQHIVASGTGMPILMLTAADRLDDKASGFELGADDYLTKPFALRELALRLRALDRRRAHSRPPVREIAGLRVDPFRREVYRDGRYVALTRKQFAVLEVLVAAEGGVVSAEELLERAWDENADPFTNAVRITVSALRKRLGEPWLIATVPGVGYRIDTGPDTDDREAERG GT:EXON 1|1-231:0| BL:SWS:NREP 1 BL:SWS:REP 1->217|CUTR_STRLI|1e-50|47.9|217/217| SEG 24->34|aiaadiagdgd| SEG 104->120|alrelalrlraldrrra| BL:PDB:NREP 1 BL:PDB:REP 3->218|2oqrA|2e-21|31.2|215/226| RP:PDB:NREP 2 RP:PDB:REP 1->103|1dc7A|1e-14|25.2|103/124| RP:PDB:REP 124->218|2d1vA|1e-18|28.4|95/103| RP:PFM:NREP 2 RP:PFM:REP 3->103|PF00072|6e-09|34.7|101/111|Response_reg| RP:PFM:REP 145->217|PF00486|3e-09|46.6|73/77|Trans_reg_C| HM:PFM:NREP 2 HM:PFM:REP 3->112|PF00072|2e-22|34.5|110/112|Response_reg| HM:PFM:REP 145->217|PF00486|2.5e-21|49.3|73/77|Trans_reg_C| GO:PFM:NREP 7 GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00072|IPR001789| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00072|IPR001789| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00072|IPR001789| GO:PFM GO:0000156|"GO:two-component response regulator activity"|PF00486|IPR001867| GO:PFM GO:0000160|"GO:two-component signal transduction system (phosphorelay)"|PF00486|IPR001867| GO:PFM GO:0003677|"GO:DNA binding"|PF00486|IPR001867| GO:PFM GO:0006355|"GO:regulation of transcription, DNA-dependent"|PF00486|IPR001867| RP:SCP:NREP 2 RP:SCP:REP 1->103|1a0oA|2e-15|25.2|103/128|c.23.1.1| RP:SCP:REP 122->219|1gxpA|6e-23|29.6|98/103|a.4.6.1| HM:SCP:REP 1->187|1s8nA_|4.3e-32|29.6|186/190|c.23.1.1|1/1|CheY-like| OP:NHOMO 7723 OP:NHOMOORG 848 OP:PATTERN -------------------------------------------------1------------------ 7BE5O365667645A9999-9C4489999996FBCB8BED7ABD8857578876935611GGF5O6GLJM8233354456EA6143666664-422---12A453F2B6A---------------32222223221DFFGHB66G5OCKCCB7889A653567AB7BIHO84534345434349B67722-A5BQQRQROPRGSQUTTODB988ARSZ69AJ7EC988979ZS4656666566666666774684749A52535445599545565353999655778856656666556455555555555573354444445LDEUKJKNLMNKHEARPP9AD7LDD879DH52YTE68234546566127B53BBB745556B9ICDC7B8FAAE9989999988B-ACDACEED7G61KIIIDBFJJH9ACK68787ADACD988BBBBBBBB8AA87B9911111111111122222222222211111258D52BDC9FMMPNSMFFFFCLLNLGEGGAHQNNFJHT12EIJE8ECBPBCGH5DGD7657721211111752ACH67522241363222-C8967776665458715A87874444441222222229B6AE55CD689AB69A5CCHHF8GBGFFIEHDEJED--23415------B9BD9D7BCCCBCCDBB-CDCBBBBBBDCBBBBBBBAFDDAB6679899999989999999DA9AAABB7-9AAAAAAAA9AA---722222333369F9G111221-23232--38755856658C9JHLKLQPNBPRRQEHHH3212132123BCCECCBCCADEBCLO98B898885545--7-444455--------2-2-------------------------3733343444483 --------------------------------------------------------------------------------------------------------------------------------------------------------------1----2-1-------2-1---------1--A-----7---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 231 STR:RPRED 100.0 SQ:SECSTR EHHTTcccccEEEEccGGGTTcHHHHHEEEEEccHHHHHHHHHHHccTTEEEEEccHHHHHHHHHHHHTTccEEEEEEccHHHHHHHHHHHHHHHHHHHHTTcHccTTccEEEEEEcHHHHHHcccEEETTEEEETTTTEEEETTEEccccHHHHHHHHHHHHTTTccccHHHHHHHHHcTTccccTHHHHHHHHHHHHHHTccccEEEETTTEEEEccTTTTHHHHHHHE DISOP:02AL 120-125, 217-231| PSIPRED cEEEEEEccHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHccccEEEEEcccccccHHHHHHHHHHccccccEEEEEccccHHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccccEEEEccEEEEcccEEEEEccEEEEccHHHHHHHHHHHHcccccccHHHHHHHHccccccccccEEHHHHHHHHHHHccccEEEEEEccEEEEcccccccccccccc //