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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55539.1
DDBJ      :             putative two-component system sensor kinase
Swiss-Prot:             

Homologs  Archaea  16/68 : Bacteria  767/915 : Eukaryota  42/199 : Viruses  0/175   --->[See Alignment]
a.274.1a.30.2d.122.1
:368 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   148->360 3dgeA PDBj 6e-14 27.2 %
:RPS:PDB   91->142 2aswA PDBj 2e-08 21.2 %
:RPS:PDB   139->364 3dgeA PDBj 2e-26 24.8 %
:RPS:SCOP  91->142 2aswA1  a.274.1.1 * 2e-09 21.2 %
:RPS:SCOP  134->204 1joyA  a.30.2.1 * 3e-09 20.9 %
:RPS:SCOP  212->360 2c2aA2  d.122.1.3 * 2e-19 26.4 %
:HMM:SCOP  126->210 2c2aA1 a.30.2.1 * 3.3e-13 30.6 %
:HMM:SCOP  209->364 2c2aA2 d.122.1.3 * 8.2e-32 36.1 %
:RPS:PFM   86->140 PF00672 * HAMP 9e-06 48.1 %
:RPS:PFM   251->362 PF02518 * HATPase_c 2e-13 35.1 %
:HMM:PFM   253->361 PF02518 * HATPase_c 8.4e-22 29.0 107/111  
:HMM:PFM   71->139 PF00672 * HAMP 1.9e-19 41.2 68/70  
:HMM:PFM   145->207 PF00512 * HisKA 1.3e-11 34.9 63/68  
:BLT:SWISS 86->360 CUTS_STRLI 3e-50 42.7 %
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55539.1 GT:GENE BAD55539.1 GT:PRODUCT putative two-component system sensor kinase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 721235..722341 GB:FROM 721235 GB:TO 722341 GB:DIRECTION + GB:PRODUCT putative two-component system sensor kinase GB:PROTEIN_ID BAD55539.1 LENGTH 368 SQ:AASEQ MARRQGLSVRAKLTLSYVGFLMLAGALLLAAVWVFLLRGRSNALLVPDLSDFRRVFDPGSFGAAVFVPAAILVLGFLLVFGLVGGWILAGRVLSPLTRITQATRAAASGSLSQRIRLPGRSDEFRELADSFDTMLAQLEAHVAEQRRFAANASHELRTPLAITQALLDVARNDPDVDTGELIERLRTVNTRAIDLTEALLLLSRADQRSFPRAHVDLSLMAEEAGETLLPLAEERGIAMETSGDITPTMGSPALLLQLITNLVHNAIIHNVPDCGSVWVRTSAHPGTVAITVENTGEKVLPHVVPMLVEPFRRGTERVHVDHAGAGLGLAIVQSITRAHNGTLTLTPRPSGGLRVTVQLPAAPSHTDG GT:EXON 1|1-368:0| BL:SWS:NREP 1 BL:SWS:REP 86->360|CUTS_STRLI|3e-50|42.7|274/414| TM:NTM 2 TM:REGION 15->37| TM:REGION 65->87| SEG 18->37|vgflmlagalllaavwvfll| SEG 72->85|lvlgfllvfglvgg| BL:PDB:NREP 1 BL:PDB:REP 148->360|3dgeA|6e-14|27.2|213/237| RP:PDB:NREP 2 RP:PDB:REP 91->142|2aswA|2e-08|21.2|52/56| RP:PDB:REP 139->364|3dgeA|2e-26|24.8|226/237| RP:PFM:NREP 2 RP:PFM:REP 86->140|PF00672|9e-06|48.1|54/69|HAMP| RP:PFM:REP 251->362|PF02518|2e-13|35.1|111/112|HATPase_c| HM:PFM:NREP 3 HM:PFM:REP 253->361|PF02518|8.4e-22|29.0|107/111|HATPase_c| HM:PFM:REP 71->139|PF00672|1.9e-19|41.2|68/70|HAMP| HM:PFM:REP 145->207|PF00512|1.3e-11|34.9|63/68|HisKA| GO:PFM:NREP 4 GO:PFM GO:0004871|"GO:signal transducer activity"|PF00672|IPR003660| GO:PFM GO:0007165|"GO:signal transduction"|PF00672|IPR003660| GO:PFM GO:0016021|"GO:integral to membrane"|PF00672|IPR003660| GO:PFM GO:0005524|"GO:ATP binding"|PF02518|IPR003594| RP:SCP:NREP 3 RP:SCP:REP 91->142|2aswA1|2e-09|21.2|52/54|a.274.1.1| RP:SCP:REP 134->204|1joyA|3e-09|20.9|67/67|a.30.2.1| RP:SCP:REP 212->360|2c2aA2|2e-19|26.4|140/151|d.122.1.3| HM:SCP:REP 126->210|2c2aA1|3.3e-13|30.6|85/0|a.30.2.1|1/1|Homodimeric domain of signal transducing histidine kinase| HM:SCP:REP 209->364|2c2aA2|8.2e-32|36.1|155/0|d.122.1.3|1/1|ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase| OP:NHOMO 6629 OP:NHOMOORG 825 OP:PATTERN ------------------------8--2-113--1---1---1-5--248424--------------2 6EO4L34577853568855-593397555555C9AA49A9698B7564633648844611BAJ2C49IBN7433354453A53222233332-71----32811191CT9--------------1313512352-2KJJKF332K3K9JSCC46835-22133784NWVY5-1--1112----CD93423-766HHIHIFIGALIJHFH895575JML355D6GA555454OJ322222222222222311134263663213244335542323322166631112113333133333211-11111111111--------22HB689A888A969383772555C492175B92HG9853-22354511-3I49ICCB44444B9KFGD86ECDEH6666666566A-HIFIIFHM7AD-FDDGII9NPIDADH67E94857557661111111146646YHB------------------------------28C546CA7CQMQRTTHCCC9PPNTEEEF7FXTOLPKR-1FHFKCKBAMFACI49IE6B59552211213649AHUHAB622I61RABAG-JDIFNZK68NHVMcn3E-1--1----------------211266C95DDD92G8575877675876767888AA--15658------CD9B88899999A9C99-9BA99A999B9A999999AEDE9B674B9ABABBAAABBBBBCD87688A94-989AAA98AAA9---522222444488J8C11111-111112--243344-3463C5EGHEENMPCFIGH9JJI2111122112698D89999899ADGGGFHFFCCC5555--K1222222--------1---------------------------24232232221K3 ----11-------14-2111--3111111----1111111111----1-11-1------111------------------------------2------12---------------------------------------------------------1------------------3-------1-131----6---- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 283 STR:RPRED 76.9 SQ:SECSTR #####################################################################################HHHHHHHHHHHHHHHHHHTTccHHTHHTcHHHHHHHHHHHHHHHHHHGGGGcTcTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccTTccHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTccccccEEEEHHHHHHHHTTHHHHHHTTcEEEEEEcccTTcEcHHHHHHHHHHHHHHHHHcccccccccEEEEcccccEEEEEEEEccccccTTTTTGGGcTTcccccTTcccccccccHHHHHHHHHHHTTcEEEEEEETTTEEEEEEEEEccccGccc DISOP:02AL 1-5, 175-178, 316-324, 364-368| PSIPRED ccHHHHHHHHHHHHHccccEEEEccHHHHHHHHHHHHcccccccEEccccccEEEEcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHccEEEEEcccccEEEEcHHHHHHHHHHHHHHHHHcccccccEEEEEEEEcccEEEEEEEEccccccHHHHHHHcccEEccccccccccccccHHHHHHHHHHHHcccEEEEEEcccccEEEEEEEEcccccccc //