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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55560.1
DDBJ      :             putative dioxygenase
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  195/915 : Eukaryota  5/199 : Viruses  0/175   --->[See Alignment]
c.1.4c.1.5
:359 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   11->334 3bw2A PDBj 3e-28 39.9 %
:RPS:PDB   11->353 3bw4A PDBj 3e-38 34.6 %
:RPS:SCOP  14->185 1ea0A2  c.1.4.1 * 5e-05 14.1 %
:HMM:SCOP  16->348 1eepA_ c.1.5.1 * 6.6e-47 33.9 %
:RPS:PFM   17->343 PF03060 * NPD 7e-15 32.7 %
:HMM:PFM   13->343 PF03060 * NPD 1.3e-80 43.6 307/323  
:BLT:SWISS 17->343 2NPD_BACSU 8e-25 28.0 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55560.1 GT:GENE BAD55560.1 GT:PRODUCT putative dioxygenase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(739336..740415) GB:FROM 739336 GB:TO 740415 GB:DIRECTION - GB:PRODUCT putative dioxygenase GB:PROTEIN_ID BAD55560.1 LENGTH 359 SQ:AASEQ MSQRPRAQTRTVIIDELRVPIVLAPMAGGPSTPELAAAVCAAGGLGTVAAGYLSAADTAARIEATRSRTDAPFGVNLFVPGPATPRTEFAGYLAELGERFALGEPRHDTDDWAAKLDLLVAAPVPVVSCTFGCPTAAEIARLHAVGTEVWVTVTSVAEARIAVETGADVLVAQGAEAGGHRATFVDRVADDAIDPLGLLALLQLLTAATDRPIVAAGGIATGAGIAAVLAAGAAAAQLGTAFLRCPEAGTNPVHRAAVPTETPTMLTRAFTGRLARGVRNDFMARHSASAPAAYPEIHFATAPLRAEARSSGNPENVNLWAGQAHSLASELPAGELVRQLAEETKAALDSALSRRIQPC GT:EXON 1|1-359:0| BL:SWS:NREP 1 BL:SWS:REP 17->343|2NPD_BACSU|8e-25|28.0|322/347| SEG 35->51|laaavcaagglgtvaag| SEG 118->127|llvaapvpvv| SEG 189->210|addaidplgllallqlltaatd| SEG 214->241|vaaggiatgagiaavlaagaaaaqlgta| BL:PDB:NREP 1 BL:PDB:REP 11->334|3bw2A|3e-28|39.9|321/347| RP:PDB:NREP 1 RP:PDB:REP 11->353|3bw4A|3e-38|34.6|341/347| RP:PFM:NREP 1 RP:PFM:REP 17->343|PF03060|7e-15|32.7|300/312|NPD| HM:PFM:NREP 1 HM:PFM:REP 13->343|PF03060|1.3e-80|43.6|307/323|NPD| GO:PFM:NREP 2 GO:PFM GO:0018580|"GO:2-nitropropane dioxygenase activity"|PF03060|IPR004136| GO:PFM GO:0055114|"GO:oxidation reduction"|PF03060|IPR004136| RP:SCP:NREP 1 RP:SCP:REP 14->185|1ea0A2|5e-05|14.1|170/763|c.1.4.1| HM:SCP:REP 16->348|1eepA_|6.6e-47|33.9|298/0|c.1.5.1|1/1|Inosine monophosphate dehydrogenase (IMPDH)| OP:NHOMO 207 OP:NHOMOORG 200 OP:PATTERN -------------------------------------------------------------------- 11--11-1111-1112111-11--1111111111111121------------1111-1------111111-----------------------------------1-----------------------------------------------------------------------------1---------1111111111111111-11111111-11-1--------11-111111-11111111--21------------------------------------------------------------------------------------------------------------------------1-----1-----111111-----1------------------2--1-1-1-------1---11------------111111111-------------------------------------------1---11112111----1131111111-1111----111111-111--1---1----1------------1-1---------------------------11-----------------------------1---1------111-1---1111-1--1-1---------------------------------------------------11----------------------------------------------------1111---1----------------------1111------1111-11111-11----------------------------------1111---------------------------------------------------------1- ------1-----------------------------------------------------------1-------------1---------------------------1----------------------------------------------------------------------------------------1- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 349 STR:RPRED 97.2 SQ:SECSTR ########cTcTTTTTccccEEEcccTTTTccHHHHHHHHHTTccEEEEcTTccHHHHHHHHHHHHHHccccEEEEEEcccccccHHHHHHHHTHHHHHcccccTTccccTHHHHHHHHHHccccEEEEEcccccHHHHHHHHHTTcEEEEEEccHHHHHHHHHTTccEEEEEcTTccEEccccccHcGGGTTccccHHHHHHHHHHHccccEEEEcccccHHHHHHHHHTTccEEEEcHHHHTcTTccccHHHHHHTGGGccEEEEcTTTcccEEEEccHHHHHHGGGccccTTHHHHHHHHHHHHHHHHTcGGGccccccTTGGGcccccHHHHHHHHHHHHHHHHHHHTcHHTc## DISOP:02AL 1-3| PSIPRED cccccccccccHHHHcccccEEEcccccccccHHHHHHHHHccccEEEccccccHHHHHHHHHHHHHHccccEEEcccccccHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHccccEEEEEcccccHHHHHHHHHcccEEEEEEccHHHHHHHHHccccEEEEEccccccccccccccccccccccccHHHHHHHHHHHcccEEEEEcccccHHHHHHHHHccccEEHHcHHHHHcccccccHHHHHHHHcccccEEEEEcccccHHHcccHHHHHHHHccccccHHHHHHHHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHcccc //