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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55563.1
DDBJ      :             putative non-ribosomal peptide synthetase
Swiss-Prot:             

Homologs  Archaea  49/68 : Bacteria  730/915 : Eukaryota  183/199 : Viruses  0/175   --->[See Alignment]
a.28.1c.43.1c.69.1e.23.1
:1943 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   26->601 2vsqA PDBj 2e-79 34.7 %
:BLT:PDB   624->1793 2vsqA PDBj e-119 32.1 %
:RPS:PDB   19->522 1amuA PDBj 5e-69 33.8 %
:RPS:PDB   522->603 2afdA PDBj 7e-14 26.8 %
:RPS:PDB   620->1046 3b30A PDBj 9e-62 8.6 %
:RPS:PDB   1028->1084 2dofA PDBj 1e-08 10.5 %
:RPS:PDB   1111->1586 3e7wA PDBj 2e-65 25.5 %
:RPS:PDB   1587->1660 1dnyA PDBj 1e-12 36.5 %
:RPS:PDB   1680->1800 3bf8A PDBj 4e-11 17.8 %
:RPS:SCOP  19->521 1md9A  e.23.1.1 * 5e-67 22.8 %
:RPS:SCOP  527->602 1dnyA  a.28.1.2 * 1e-18 36.0 %
:RPS:SCOP  624->800 1l5aA1  c.43.1.2 * 7e-36 19.0 %
:RPS:SCOP  831->1051 1q9jA2  c.43.1.2 * 3e-19 13.5 %
:RPS:SCOP  1025->1603 1pg3A  e.23.1.1 * 3e-70 18.4 %
:RPS:SCOP  1587->1662 1dnyA  a.28.1.2 * 2e-18 38.2 %
:RPS:SCOP  1675->1932 1jmkC  c.69.1.22 * 2e-28 20.3 %
:HMM:SCOP  18->543 1pg4A_ e.23.1.1 * 8.4e-159 41.3 %
:HMM:SCOP  527->636 1klpA_ a.28.1.1 * 5.6e-22 40.0 %
:HMM:SCOP  624->817 1l5aA1 c.43.1.2 * 1.2e-46 42.0 %
:HMM:SCOP  808->1081 1l5aA2 c.43.1.2 * 6.5e-61 42.7 %
:HMM:SCOP  1049->1603 1pg4A_ e.23.1.1 * 5.1e-172 41.9 %
:HMM:SCOP  1587->1662 1dnyA_ a.28.1.2 * 1.7e-17 44.7 %
:HMM:SCOP  1664->1934 1xktA_ c.69.1.22 * 4.1e-56 34.7 %
:RPS:PFM   49->450 PF00501 * AMP-binding 7e-45 41.6 %
:RPS:PFM   541->599 PF00550 * PP-binding 5e-08 49.2 %
:RPS:PFM   623->917 PF00668 * Condensation 5e-50 49.7 %
:RPS:PFM   1114->1497 PF00501 * AMP-binding 8e-38 35.9 %
:RPS:PFM   1600->1660 PF00550 * PP-binding 1e-06 42.9 %
:RPS:PFM   1687->1916 PF00975 * Thioesterase 8e-22 42.7 %
:HMM:PFM   49->451 PF00501 * AMP-binding 1.3e-108 39.6 396/418  
:HMM:PFM   1114->1511 PF00501 * AMP-binding 8.5e-119 39.3 394/418  
:HMM:PFM   620->920 PF00668 * Condensation 1.2e-66 36.3 292/301  
:HMM:PFM   1688->1922 PF00975 * Thioesterase 3.2e-36 29.1 213/229  
:HMM:PFM   538->601 PF00550 * PP-binding 3.6e-16 43.8 64/67  
:HMM:PFM   1597->1659 PF00550 * PP-binding 2.9e-14 41.3 63/67  
:BLT:SWISS 30->1929 DHBF_BACSU 0.0 43.0 %
:PROS 560->575|PS00012|PHOSPHOPANTETHEINE
:PROS 176->187|PS00455|AMP_BINDING
:PROS 1234->1245|PS00455|AMP_BINDING
:TM
:REPEAT 2|48->606|1113->1666
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55563.1 GT:GENE BAD55563.1 GT:PRODUCT putative non-ribosomal peptide synthetase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 749772..755603 GB:FROM 749772 GB:TO 755603 GB:DIRECTION + GB:PRODUCT putative non-ribosomal peptide synthetase GB:PROTEIN_ID BAD55563.1 LENGTH 1943 SQ:AASEQ MSGARSRPVRSRRPRVPVFPQLLAAAVEASPDRTAVVFADATRTLGSLTYAELDARSTRLARALIARGVGPEDLVALGMPRSLESVVGMWAVAKTGAGFLSVDPAYPADRVAHMLADSGAVLGLTVAEVAESLPAQVDWLVVDGERVRAECAAQSSELITNADRTRPLRAEHPAYVIYTSGSTGLPKGVVVSHAGIAGIRAEQAARYEVDGASRVLHFASPSFDLSVFEHLLMLAGAATLVVVPPTVYGGAELAELLRRERVTHVGMTPSVLASLDPAGLDDLRVVVAAGEACPPELVRRWTIPLPDGRSRRFFNGYGPTETTIVTNLSDALVPDRPVTLGPPLRTVREYVLDERFVPVPVGAVGELYIAGPQLARGYRARPALTASRFVANPFEAGTRLYRTGDLVRRLADGDLEYLGRNDFQVKIRGFRIELGEIDAVLAGHESVSFAVTVGHRLDNDATVLAAYVVPADGAEIDIEALIAHAAAALPAHMVPTAITVLDEIPLTPVGKLDRRALPAPVLRTTEFRAPSGRLEELVAGVFAQVLGGDVRVGADDDFFELGGNSLIATRVAARLGAELGVRVDARAVFEAPTVSGLAARLADTTGHETRRALRAGPRPERIPLSLAQQRMWFLNRFEPDSAAYTIPIALRMTGALDVPALAAAVRDLVARHEVLRTVYPETAEGPAQVILPPGDRTPELEVRDVVPEQLHTAVAGVLGAGFDVTAEVPLRIVLFRVAPEDFVLAIAVHHISGDGSSGGPLTRDLMTAYAARAAGHAPEWAPLPVQYADYSIWQREVLGSEDDPDTAAARQIAYWRAELAGLPDQLDLPTDRPRPAVQSYDGDVVDIRIDAELHRGLVELARAEGATLFMVVHTALAVLLARLSGGDDVAVGTPIAGRGEAVLDDLIGMFVNTLVFRSRIDPGESFTELLARQRETDLRAFAHADVPFERLVEVLNPVRSTARHPLFQVGFSFQNLAEASLELPGLRVSGLDVDVHVSQFDLHWIVGDRYDESGAPAGMGGALTYATALFDPATVRGFVDRFERLLREVVAAPRTAVGEIDLLDPVERERLTRGVNATDHPLPPGTLADLLDASAAAASAHAVALVDADRRRISWPELDARVNRLARTLIARGVGPEDRVALALRRGVDLVVAMYAVARAGGAYVPVDPDQAAERTDYILRTAAPVLVLTDAATGFTTEVAPVLPVDGPVADSAAPITDADRRAPLRPDHTAYVIFTSGSTGRPKGVAVPHAAVVNQLRWKVSEFRMTADDAVLLKTPATFDLSVWEFWSAAACGGRLVIAAADGHRDPARLHELMERENVTVLHTVPSMLDALLTASGEALSGSLRCVLAIGEALPAALAQRALASGVALFNLYGPTEAAVSITGHHVTDADQISVPIGRPEWNCRVYVLDARLRPVPVGVSGELYLAGAQLARGYFGKPELTAERFVANPFAAGERMYRTGDVVAWNSGGELEYRGRADFQVKIRGFRIELGEIEAVLQAQPGVAAAAVAAKSDATTGERLVAYLVPSDPVAGVDVATLPSRLAGRLPSYMVPSAFVVLDALPLNVNGKLDRKALPDPVFEAREFRAPTTPLEETVTAVFAEALGVDAVGLDDNFFERGGNSLVATRVAARLGAELGIPVPVMWLFTTPTPAGVVAQVIAERTGVGSISRTAFDVLLPLRAGTGAPLFCIHPLGGIAWSFAGLAAHLETDRPIYGLQSPALGSRESLPDSTEKWALRYLEEIRSVQPQGPYHLLGWSLGGVLAHAIAVQLQEEGERVELLAMMDSYLPEAIDPSMIPAEPVPMTELLGGLLGQQVTDLGIDDGAPGPAELARRLAQLPEPFASFGADRIERVLTAARHSLRVTAGYRPHRFEGDLVYFSAVEDEPTGRLGADTWTSAIGGRIDTHPVPTTHWRMTTTAGLSAIGRVLDRFFTAAERTDPTP GT:EXON 1|1-1943:0| BL:SWS:NREP 1 BL:SWS:REP 30->1929|DHBF_BACSU|0.0|43.0|1856/2378| PROS 560->575|PS00012|PHOSPHOPANTETHEINE|PDOC00012| PROS 176->187|PS00455|AMP_BINDING|PDOC00427| PROS 1234->1245|PS00455|AMP_BINDING|PDOC00427| TM:NTM 1 TM:REGION 226->248| NREPEAT 1 REPEAT 2|48->606|1113->1666| SEG 5->18|rsrpvrsrrprvpv| SEG 474->492|aeidiealiahaaaalpah| SEG 655->671|aldvpalaaavrdlvar| SEG 1087->1109|ladlldasaaaasahavalvdad| SEG 1355->1370|alpaalaqralasgva| SEG 1498->1513|avlqaqpgvaaaavaa| BL:PDB:NREP 2 BL:PDB:REP 26->601|2vsqA|2e-79|34.7|553/1273| BL:PDB:REP 624->1793|2vsqA|e-119|32.1|1115/1273| RP:PDB:NREP 7 RP:PDB:REP 19->522|1amuA|5e-69|33.8|480/509| RP:PDB:REP 522->603|2afdA|7e-14|26.8|82/88| RP:PDB:REP 620->1046|3b30A|9e-62|8.6|408/446| RP:PDB:REP 1028->1084|2dofA|1e-08|10.5|57/85| RP:PDB:REP 1111->1586|3e7wA|2e-65|25.5|471/508| RP:PDB:REP 1587->1660|1dnyA|1e-12|36.5|74/76| RP:PDB:REP 1680->1800|3bf8A|4e-11|17.8|118/255| RP:PFM:NREP 6 RP:PFM:REP 49->450|PF00501|7e-45|41.6|382/405|AMP-binding| RP:PFM:REP 541->599|PF00550|5e-08|49.2|59/67|PP-binding| RP:PFM:REP 623->917|PF00668|5e-50|49.7|286/297|Condensation| RP:PFM:REP 1114->1497|PF00501|8e-38|35.9|374/405|AMP-binding| RP:PFM:REP 1600->1660|PF00550|1e-06|42.9|61/67|PP-binding| RP:PFM:REP 1687->1916|PF00975|8e-22|42.7|206/219|Thioesterase| HM:PFM:NREP 6 HM:PFM:REP 49->451|PF00501|1.3e-108|39.6|396/418|AMP-binding| HM:PFM:REP 1114->1511|PF00501|8.5e-119|39.3|394/418|AMP-binding| HM:PFM:REP 620->920|PF00668|1.2e-66|36.3|292/301|Condensation| HM:PFM:REP 1688->1922|PF00975|3.2e-36|29.1|213/229|Thioesterase| HM:PFM:REP 538->601|PF00550|3.6e-16|43.8|64/67|PP-binding| HM:PFM:REP 1597->1659|PF00550|2.9e-14|41.3|63/67|PP-binding| GO:PFM:NREP 8 GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| GO:PFM GO:0048037|"GO:cofactor binding"|PF00550|IPR006163| GO:PFM GO:0003824|"GO:catalytic activity"|PF00501|IPR000873| GO:PFM GO:0008152|"GO:metabolic process"|PF00501|IPR000873| GO:PFM GO:0048037|"GO:cofactor binding"|PF00550|IPR006163| GO:PFM GO:0009058|"GO:biosynthetic process"|PF00975|IPR001031| GO:PFM GO:0016788|"GO:hydrolase activity, acting on ester bonds"|PF00975|IPR001031| RP:SCP:NREP 7 RP:SCP:REP 19->521|1md9A|5e-67|22.8|486/536|e.23.1.1| RP:SCP:REP 527->602|1dnyA|1e-18|36.0|75/76|a.28.1.2| RP:SCP:REP 624->800|1l5aA1|7e-36|19.0|174/174|c.43.1.2| RP:SCP:REP 831->1051|1q9jA2|3e-19|13.5|207/225|c.43.1.2| RP:SCP:REP 1025->1603|1pg3A|3e-70|18.4|572/634|e.23.1.1| RP:SCP:REP 1587->1662|1dnyA|2e-18|38.2|75/76|a.28.1.2| RP:SCP:REP 1675->1932|1jmkC|2e-28|20.3|212/222|c.69.1.22| HM:SCP:REP 18->543|1pg4A_|8.4e-159|41.3|521/643|e.23.1.1|1/2|Acetyl-CoA synthetase-like| HM:SCP:REP 527->636|1klpA_|5.6e-22|40.0|110/115|a.28.1.1|1/2|ACP-like| HM:SCP:REP 624->817|1l5aA1|1.2e-46|42.0|174/0|c.43.1.2|1/1|CoA-dependent acyltransferases| HM:SCP:REP 808->1081|1l5aA2|6.5e-61|42.7|246/0|c.43.1.2|1/1|CoA-dependent acyltransferases| HM:SCP:REP 1049->1603|1pg4A_|5.1e-172|41.9|544/643|e.23.1.1|2/2|Acetyl-CoA synthetase-like| HM:SCP:REP 1587->1662|1dnyA_|1.7e-17|44.7|76/76|a.28.1.2|2/2|ACP-like| HM:SCP:REP 1664->1934|1xktA_|4.1e-56|34.7|265/0|c.69.1.22|1/1|alpha/beta-Hydrolases| OP:NHOMO 8322 OP:NHOMOORG 962 OP:PATTERN 33-1--6698999887--33432A833411683-21--212116465612323--------142---1 3195b874335B5AbhSLL-LaAAqmLLLLLOcYeZgv**2XDW3-14295-73986A--XZF3jIgdLg9--------265E--2--4411-1--1---18--1H-222-------1111111121-11--14--788CD--1l689B3EEE--1111111111-4K9Y4-1111-12-11-74565--2CAQBBCBCHBGCBEEGIC78EEHLBCJCFBC944333333W42555554555555554333321211112121131111111222111111112116511111111111111111111211111112211121---62222622112I277------51-7114-DB4151--931111---8-6A779-1--199SKU546UPTKK23332232334-DCACDGBCAFE-ABBF886A7CA6AL6A6BDJ335469F11111111921-3D74------------------------------9DWD-7HGBEGMOPQPOJMMGFFIUabbaGYTEWXbjN24HGF7AHAAPCCHSH239--2-B32222222234E673NF55446685444-4654614366766iI871121-111212-2-------12215--7A14786444565553A8555538564378--11862------E5LB644677E6EF965-668676A699799666665577BCRV46455666676656556945566651-587878555474---313131766655R1C111111-111-1--299AD938457D5LOINTRIJCFCEC7JIO311112111-122C677776314455635333331121--1-111111--------1-------------------------------------1C- ----335-12--78GNRRGVQZQkienGGFFEFMTRLDCDEEDEDCKFMfRTSSJHUPEAAB73343233412224122133332224-BG9RAB52221427CBB-6B6G1G15343-2-15163-3-6V3-349132-321621231131-13552B3435J8D47BDD5DC91135P22474G9AQUFE33C796A ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 1915 STR:RPRED 98.6 SQ:SECSTR ##################HHHHHHHHHHHcTTcEEEEETTEETccEEEEHHHHHHHHHHHHHHHHHTTccTTcEEEEEccccHHHHHHHHHHHHTTcEEEEccTTccHHHHHHHHHHHTccEEEEcGGGHHHGcccccHTTcccccEEEEccccTTTTcccccccccccTTcEEEEEEEcccccccEEEEEEcHHHHHHHHHHHHTccccTTcEEEEcccTTcTHHHHHHHHHHTTTcEEEEccHHHHTcHHHHHHHHHTTccEEEEcHHHHTTccTTTcccccEEEEEcccccHHHHHHHTTTcETTcEEEEEEEEccGGGccccEEEEcccccccccccEEcTTEEEEEEcTTcccccTTcEEEEEEEETTcccEETTcHHHHHHHEEEccccTTcEEEEEEEEEEEcTTccEEEEEEGGGEEEETTEEEEHHHHHHHHTTcTTEEEEEEEEEEcTTccEEEEEEEEEcccccccHHHHHHHHHHHccGGGcccEEEEcccccccTTccccGGGcccccccHHTHHHHTTcHHHHHHHHHHHHHHHHHHHHHHHTTcEEcccccEEcccccccccccEEEETTEEEEEHccccHHHHHcEEEEEEEEEcccTTTcccccEEccGGGGcHHHHTcEEEEEEEEEEEcccGGGHHHHHHHHHHHHHHHHHHcGGGGcEEETTcccEEEEEcccccHHHHHHHTccGGGccHHHHcccccccccTTccTTcccccEEEEcTEEEEEEEEETTTccHHHHHHHHHHHHHHHHTccccHTTcHHHHHHTTcccTTcccccccHHHHHEcTTccccGGGTTccccTTcccccccEEEEEEEEcHHHHHHHHHHHHTTccTTcccccHHHHHHHHHHHHHHHHHTTTccTTcEEEEEEEEEcHHHHTccTTcccccEEEEEEHHHHHHccHHHHHHHHHTTccHHHHHHHHHHHHHHHHccccTTccTTTTccTTTcEEEEEcTTccGGGccTTcccEcccccccTTEEEEccccTTccccccEEEEEEEEHHHHHHHHHcHHHHTTcEEcEEEEccccccccGGGGcccGGGccEcEEEEEEETTEEEEEEEETTTTEEEEEEccccccccccEEEEEHHHHHHHHHHHHHHHTTTcccccccEEEEEcccHHHHHHHHHHHHHTccEEEEETTccHHHHHHHHHHHTccEEEEcccccTTcccccccEEEHHHHHTcccccccGGEGcccTTcEEEEEEEccTTcccEEEEEEHHHHHHHHHHHHHHcTTTTTcEEEEcccTTcTHHHHHHHHHHHTTcEEEEccHHHHHcHHHHHHHHHHHcccEEEEcHHHHHHHHTccTTTcTTccEEEEcccccHHHHHHHHHHcTTcEEEEccccGGGccccEEEEEcHHHHTTccccEEcTTcEEEEEcTTcccccTTccEEEEEEcTTcccccTTcHHHHHHHEEEcccHHEEcEEEEEEEEEEEETTEEEEEEEcccEEEETTEEEEHHHHHHHHHHcTTEEEEEEEEEcccccccEEEEEEEEcccccHHHHHHHHHHHHHHccGGGcccEEEEcccccccTTccccHHHHHHHHHHHHTEEccGGGHHHHHcGGGHHHHHHHEEEEEEcEEEccccHHHHHHHHHHHHHHHTccccHHHHTTcccHHHHHHHHHHHHHccccEEcccccEEccccccccccEEEEccTTccTTTTHHHHHHHTTTccEEEEccTTcTTccccccccHHHHHHHHHHHHHHHTcccEEEEEETHHHHHHHHHHHHcGGcGGGEEEEEEEccccccccccccHHHHHHHHHcccHHHHHTcTTHHHHHHHHTHHHHHHHHcccTTccccccTTTTTTTTcccccccccccccccccHHHHHHHHHHHHHHTTHHHHTTGGGHHHHHHHHGGGTTccccccEEEEEE##HHHHHHHHHHHH######## DISOP:02AL 1-3, 1662-1677, 1936-1943| PSIPRED ccccccccccccccccccHHHHHHHHHHHccccEEEEEccccccccEEcHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHHccEEEEccccccHHHHHHHHHHcccEEEEEcHHHHHHccccccEEEEEccccccccccccccccccccccccccccccEEEEEcccccccccEEEEcHHHHHHHHHHHHHHcccccccEEEEEcHHHHHHHHHHHHHHHHHccEEEEcccccccHHHHHHHHHHccccEEEEcHHHHHHHHHHcccccEEEEEEcccccHHHHHHHHHHcccccccEEEEccccHHHHHEEEccccccccccccccccccccEEEEEcccccccccccccEEEEccccHHHHHcccHHHHHHHHHccccccccccEEEccEEEEccccEEEEEEccccEEEEccEEccHHHHHHHHHHccccccEEEEEEEcccccEEEEEEEEEcccccccHHHHHHHHHHHcHHHccccEEEEcccccccccccccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHccccHHHHHHHHHHHHHHHHccccccccccccccccHHHHHHHHHHHHcccccEEEEEEEEEEcccccHHHHHHHHHHHHHHcccEEEEEEEcccEEEEEEEccccccEEEEEccccHHHHHHHHHHHHHccccccccccEEEEEEEEccccEEEEEEccHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEEEccHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHcccccEEEEEEEccccHHHHHHHHHHHHcEEEEEEEEcccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHccccccccccccHHHHHccccccccccccccEEEEEcccccccccccEEEEEEcccccccccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHccHHHHccccHHHHHHHHHHccccccccccccHHHHHHHHHHHcccccEEEEEccccEEcHHHHHHHHHHHHHHHHHcccccccEEEEEEcccHHHHHHHHHHHHHccEEEEccccccHHHHHHHHHHcccEEEEEccHHccccccccEEEEcccccccccccccccccccccccccEEEEEcccccccccEEEEcHHHHHHHHHHHHHHcccccccEEEEEcHHHHHHHHHHHHHHHHHccEEEEEcccccccHHHHHHHHHHccccEEEccHHHHHHHHHccccccccccEEEEEEcccccHHHHHHHHHcccEEEEccccccHHHEEEEEcccccccccccccEEccccEEEEEcccccccccccEEEEEEcccHHHHHHcccHHHHHHHHccccccccccEEEEccEEEEccccEEEEEEEcccEEEEccEEEcHHHHHHHHHHccccEEEEEEEEEccccccEEEEEEEEccccccccHHHHHHHHHHHcHHHccccEEEEccccccccccHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHccccccccccHHHHcccHHHHHHHHHHHHHHccccccHHHHHccccHHHHHHHHHHccccccccccccccccccccccccccEEEEcccccHHHHHHHHHHHccccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHcccccEEEEEEcHHHHHHHHHHHHHHHcccEEEEEEEEcccccccccHHHccHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHccHHcccccHHHHHHHHHHHHHHHHHHHcccccccccEEEEEEEccccccccccHHHHHHHccccEEEEEcccccHHHcccHHHHHHHHHHHHHHHHcccccccc //