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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55567.1
DDBJ      :             putative oxidoreductase
Swiss-Prot:             

Homologs  Archaea  1/68 : Bacteria  35/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.2.1
:328 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   2->31 2iodD PDBj 5e-04 60.0 %
:RPS:PDB   1->79 3dr3A PDBj 2e-07 15.2 %
:RPS:SCOP  1->285 1kbzA  c.2.1.2 * 2e-11 14.7 %
:HMM:SCOP  1->320 1qycA_ c.2.1.2 * 2.6e-31 24.6 %
:RPS:PFM   4->60 PF05368 * NmrA 5e-05 50.0 %
:HMM:PFM   5->34 PF07993 * NAD_binding_4 2.3e-08 43.3 30/249  
:HMM:PFM   85->211 PF07993 * NAD_binding_4 4.5e-15 28.2 124/249  
:BLT:SWISS 144->234 LGRD_BREPA 5e-04 32.1 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55567.1 GT:GENE BAD55567.1 GT:PRODUCT putative oxidoreductase GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(783154..784140) GB:FROM 783154 GB:TO 784140 GB:DIRECTION - GB:PRODUCT putative oxidoreductase GB:PROTEIN_ID BAD55567.1 LENGTH 328 SQ:AASEQ MTSLVTGATGFIGRFLVPALLRRGDTVHVLVPPDERGRYDTCARDWAGGERVRPVEADLDRVDPAWVRAHRGDIEHVFHLDPAAGAAQHAIALAAGLDAARLHHVSTVEISGDHHGAFTEDMFDVGQTLRPAQRVHLDAERAVRASGLDWRIYRPAIVIGHSRTGEIDRAGSAQRFFRMLRMAAQLPRLLPVLVPRLGETNMVPVDFVVAALDHLAHAPGGRHTTFHLVDPVRTRAVDALNLFADEAGAPHLVEVMPKDTLRAVLRLPGAQRMLPSVGIDPAVLEHNEFGCWFDRANTTAGLAGTDITVPPLADYAPRIWKYWTENGA GT:EXON 1|1-328:0| BL:SWS:NREP 1 BL:SWS:REP 144->234|LGRD_BREPA|5e-04|32.1|84/5085| SEG 83->104|aagaaqhaialaagldaarlhh| SEG 186->197|lprllpvlvprl| BL:PDB:NREP 1 BL:PDB:REP 2->31|2iodD|5e-04|60.0|30/321| RP:PDB:NREP 1 RP:PDB:REP 1->79|3dr3A|2e-07|15.2|79/335| RP:PFM:NREP 1 RP:PFM:REP 4->60|PF05368|5e-05|50.0|52/234|NmrA| HM:PFM:NREP 2 HM:PFM:REP 5->34|PF07993|2.3e-08|43.3|30/249|NAD_binding_4| HM:PFM:REP 85->211|PF07993|4.5e-15|28.2|124/249|NAD_binding_4| RP:SCP:NREP 1 RP:SCP:REP 1->285|1kbzA|2e-11|14.7|272/298|c.2.1.2| HM:SCP:REP 1->320|1qycA_|2.6e-31|24.6|297/307|c.2.1.2|1/1|NAD(P)-binding Rossmann-fold domains| OP:NHOMO 41 OP:NHOMOORG 36 OP:PATTERN ---------------------------1---------------------------------------- --------------11111-11--211111122---1111----------------------2---------------------------------------------1------------------------------------------------------------------------------------------------------------------11--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1----111----1-----------------------------------------------1------------------------------11--1----------------------------------------------------------------------------------------------------------------------------------------1-----------------------------------------------------------2----------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 326 STR:RPRED 99.4 SQ:SECSTR EEEEEETTTcHHHHHHHHHHHHcTTEEEEEEEEETTcTTTTccHHHHcGGGTTTccccEEEEccGGGTcTTccEEEEcccccGGGcGGGHHHHHHHHHHccccEEEcccccccGGccHGccccHHHHHHHHHHHHHHHHHHHHHHHTcccEEEEccEEHHHcccccTTcccGGGHHHHHHcccccccTTccEEEETTcccEEEEEcHHHHHHHHHHcGGGTTEEEEcccGGGEEEHHHHHHHHHHHHTccccEEEEcHHHHHHHHHHccTHHHHHHHHHHHTTcTTTccccccccEEGGGTcTTcccccccHHHHHHHHHTTcccc## DISOP:02AL 328-329| PSIPRED cEEEEEccccHHHHHHHHHHHHcccEEEEEEcccccHHHHHHHHcccccccEEEEEcccccccHHHHHHHHccccEEEEEccHHHHHHHHHHHHHHcccccEEEEEEEEEEcccccccccccccccccccHHHHHHHHHHHHHHHccccEEEEEccEEEcccccccccccHHHHHHHHHHHHHHHcccccEEEcccccEEEEEEHHHHHHHHHHHHHcccccccEEEEccccEEEHHHHHHHHHHHHccccccccccHHHHHHHcccHHHHHHHHHccccHHHHHHHccccccccHHHHHHHHHcccccccHHHHHHHHHHHHHHHcc //