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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55573.1
DDBJ      :             putative ABC transporter membrane protein
Swiss-Prot:             

Homologs  Archaea  19/68 : Bacteria  106/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
:295 amino acids
:PSIPRED
:DISOPRED
:RPS:PFM   53->256 PF01061 * ABC2_membrane 1e-10 31.2 %
:HMM:PFM   53->255 PF01061 * ABC2_membrane 2.6e-17 25.9 193/208  
:BLT:SWISS 40->289 DRRB_STRPE 5e-20 28.5 %
:PROS 139->178|PS00041|HTH_ARAC_FAMILY_1
:TM
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55573.1 GT:GENE BAD55573.1 GT:PRODUCT putative ABC transporter membrane protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 790237..791124 GB:FROM 790237 GB:TO 791124 GB:DIRECTION + GB:PRODUCT putative ABC transporter membrane protein GB:PROTEIN_ID BAD55573.1 LENGTH 295 SQ:AASEQ MSSVETTARQTTAPEEASATTADTEGFRPLPTVRPRSENAPATWARHSLLQCKRLLIGWLRDPATTIQTLIYPAATLLMFKIVLGNAIGSATGMPAVYGQVPMITLVAAMSGAVVSALGFKVERATGLLGRFYTMPMNRAAGLTGRLLAEAVRVLITTLFVLAVGLALGFRFGQGPLAALALIGIPVLFGVGFAVLVTALATLTEGVLLVSIIGIVNTLLMFFNTGFVPVFAYPTWLQDVVANQPMSTAIDAMRGLSYGGPVAEPLLKTLAWTIGLIVVFAWPAIRGYRRAAERG GT:EXON 1|1-295:0| BL:SWS:NREP 1 BL:SWS:REP 40->289|DRRB_STRPE|5e-20|28.5|249/283| PROS 139->178|PS00041|HTH_ARAC_FAMILY_1|PDOC00040| TM:NTM 6 TM:REGION 69->91| TM:REGION 100->122| TM:REGION 149->171| TM:REGION 177->199| TM:REGION 209->231| TM:REGION 266->288| SEG 11->25|ttapeeasattadte| RP:PFM:NREP 1 RP:PFM:REP 53->256|PF01061|1e-10|31.2|199/208|ABC2_membrane| HM:PFM:NREP 1 HM:PFM:REP 53->255|PF01061|2.6e-17|25.9|193/208|ABC2_membrane| GO:PFM:NREP 1 GO:PFM GO:0016020|"GO:membrane"|PF01061|IPR013525| OP:NHOMO 209 OP:NHOMOORG 125 OP:PATTERN 11-----1111111--11-----------1--------1-----2-----111--------1--1--- ---15----------4222-22112-22222224347666132426-2----11---1--51--141338-------------------------------------------------------11---------111-------1-1-11---11------111-211-----------1------11-1--11111111-11111111----111-11----111111-3----------------------1--------11-----------11-------------------------------------------------------------11---------------1--1---------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------11-1-----------------------------------------------------------------1---------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 1-24, 291-295| PSIPRED ccccccccccccccccccccccccHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHccHHHccHHHHHHHHHccHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc //