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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55588.1
DDBJ      :             hypothetical protein
Swiss-Prot:             

Homologs  Archaea  0/68 : Bacteria  16/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
a.211.1
:187 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:RPS:PDB   24->135 2c1gA PDBj 3e-07 9.2 %
:RPS:SCOP  30->82 2pq7A1  a.211.1.1 * 1e-04 28.3 %
:HMM:PFM   30->102 PF01966 * HD 3.1e-11 30.1 73/118  
:HMM:PFM   130->142 PF07973 * tRNA_SAD 0.0005 45.5 11/44  
:BLT:SWISS 39->103 CNPD_CHLPD 2e-05 41.5 %

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55588.1 GT:GENE BAD55588.1 GT:PRODUCT hypothetical protein GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 799799..800362 GB:FROM 799799 GB:TO 800362 GB:DIRECTION + GB:PRODUCT hypothetical protein GB:PROTEIN_ID BAD55588.1 LENGTH 187 SQ:AASEQ MATITAARSILRVDDVSAALLAPLSTARRAHSIAVGERMAGVAHRLAPELRADAETAAYLHDVGYGYPDTGFHPIDGARLLRSMGNSAVVCHLVAFHTAAVVEADVRGLDRRIFGPFALEDVPGLAVAEDFLWWADLCTGPHGEACTVDERISEILRRYEPGSIVHTAICRAEGRLRAAAQRASESM GT:EXON 1|1-187:0| BL:SWS:NREP 1 BL:SWS:REP 39->103|CNPD_CHLPD|2e-05|41.5|65/525| RP:PDB:NREP 1 RP:PDB:REP 24->135|2c1gA|3e-07|9.2|109/384| HM:PFM:NREP 2 HM:PFM:REP 30->102|PF01966|3.1e-11|30.1|73/118|HD| HM:PFM:REP 130->142|PF07973|0.0005|45.5|11/44|tRNA_SAD| RP:SCP:NREP 1 RP:SCP:REP 30->82|2pq7A1|1e-04|28.3|53/174|a.211.1.1| OP:NHOMO 19 OP:NHOMOORG 16 OP:PATTERN -------------------------------------------------------------------- ----1---------11-----2--1--------2121-1---111---------------------1-1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------1--------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 109 STR:RPRED 58.3 SQ:SECSTR #######################HHHHHHHHHHHHcccccEEc###cGGGcccHHHHHHcccEEEcccEEHHHcHHHHHHHHccTTEEEEEETTcHHHHHHHHHHHHHHHHTTcEEccHHHHHGGGccTTcEEcc#################################################### DISOP:02AL 1-4, 181-187| PSIPRED cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccHHHHHHHHHHcccccccccccccHHHHHHHccccHHHHHHHHHHHHHHHHHHHHccHHHHccHHHHcccccEEEHHHHEEEEEcccccccccccHHHHHHHHHHHccccHHHHHHHHHcccHHHHHHHHHHccc //