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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55599.1
DDBJ      :             putative regulator
Swiss-Prot:             

Homologs  Archaea  3/68 : Bacteria  214/915 : Eukaryota  0/199 : Viruses  0/175   --->[See Alignment]
c.93.1
:357 amino acids
:SECSTR
:PSIPRED
:DISOPRED
:BLT:PDB   40->295 1qo0B PDBj 1e-16 28.6 %
:RPS:PDB   31->281 3cznA PDBj 3e-23 12.3 %
:RPS:SCOP  16->299 1usgA  c.93.1.1 * 1e-25 14.4 %
:HMM:SCOP  14->352 1qo0A_ c.93.1.1 * 4.7e-51 28.2 %
:RPS:PFM   232->282 PF00506 * Flu_NP 6e-04 31.4 %
:BLT:SWISS 17->62 LIVB3_BRUSU 3e-05 37.0 %
:BLT:SWISS 40->295 AMIC_PSEAE 4e-16 28.6 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55599.1 GT:GENE BAD55599.1 GT:PRODUCT putative regulator GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION 813309..814382 GB:FROM 813309 GB:TO 814382 GB:DIRECTION + GB:PRODUCT putative regulator GB:PROTEIN_ID BAD55599.1 LENGTH 357 SQ:AASEQ MTGGPALRRADSSVWRLAMVVPLQGPAGLFGPSCEAVGELAVRDLNEAGGVRGRAVELEIVDGGAEPAAVAAEVAGLVAANRIDAVTGWHISSVRNALAPVLSGRVPYAYSSLYEGGESRPGVFCSGETPYQQIEPALRWLRDNAGARRWFVVGDDYVWPQRSLHHIRDFARELDLDLVGGAFVRLGGGNMREVVERIARSSCDAVLMLLVGQDAVDFNRAFARRGLHEDLLRFSPLMEENMLLASGETATRGLVVASGFFRTLVDADSMELLARYTALHGRFAPVIGAAAESCYEGAQLLATLAARGDAAAGGPVDGLAYRGPRGTVEFRGREARQRIHLAVANGYDFDILTTFTR GT:EXON 1|1-357:0| BL:SWS:NREP 2 BL:SWS:REP 17->62|LIVB3_BRUSU|3e-05|37.0|46/368| BL:SWS:REP 40->295|AMIC_PSEAE|4e-16|28.6|252/385| SEG 63->80|ggaepaavaaevaglvaa| SEG 300->320|llatlaargdaaaggpvdgla| BL:PDB:NREP 1 BL:PDB:REP 40->295|1qo0B|1e-16|28.6|252/374| RP:PDB:NREP 1 RP:PDB:REP 31->281|3cznA|3e-23|12.3|235/1014| RP:PFM:NREP 1 RP:PFM:REP 232->282|PF00506|6e-04|31.4|51/498|Flu_NP| GO:PFM:NREP 1 GO:PFM GO:0005198|"GO:structural molecule activity"|PF00506|IPR002141| RP:SCP:NREP 1 RP:SCP:REP 16->299|1usgA|1e-25|14.4|278/345|c.93.1.1| HM:SCP:REP 14->352|1qo0A_|4.7e-51|28.2|337/0|c.93.1.1|1/1|Periplasmic binding protein-like I| OP:NHOMO 349 OP:NHOMOORG 217 OP:PATTERN ------------------------1---1--2------------------------------------ ----1--2112----------2---2------21113321------------1-----------1--2-------1----------------1-------------1---------------------------------------2-12--111--211111111-111111-11111-1-1--1------------------------1--------1------------1-------------------------------------------------------------------------------------------------------------------1--------------------1---------------117AA---32642------------35222137-2--4331---2221-411--1-111112-222222222----1------------------------------------------11222411111111421111112351121-1111121--212124-11-2-1-----------1-21-----------------------------1--1-----------------------------121----1-----------------12----1-1------1121-11------------------------------11111-------------------1---------111111111111------------112111---------------------1-1--122221111211211312----------------------11----------------1-------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- STR:NPRED 284 STR:RPRED 79.6 SQ:SECSTR ###########cEEEEEEEEEccccTTHHHccTTEEEcEEEEEcccccccccTTcccccEEEccccEEEEcTTccEEHHTTcEEcTTccEEEEEccTTccEEEEEEEEEEccccccccccccccccccccEEcccccccEEEEEccccccEEEEEEETTEETTHEEEEEcccccEEEEEEEEEEccTTcTTEEEEEEEEccccTTEEEEEETTTEEEEEEccTTccGGGGEccEEEEEcccEEEEEEGGEcccEEEEcccTTEEEEEEEEEccccccccccTcHHcccccHHHHH############################################################## DISOP:02AL 5-7| PSIPRED ccccccccccccccEEEEEEEcccccHHHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEcccccHHHHHHHHHHHHHccccEEEEccccHHHHHHHHHHHHccccEEEEEccccccccccEEEEcccHHHHHHHHHHHHHHHccccEEEEEEcccHHHHHHHHHHHHHHHHccccEEEEEEEccccccHHHHHHHHHHccccEEEEEEccHHHHHHHHHHHHccccccEEEEEccccHHHHHHHcHHHHccEEEEEccccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHcccccEEEEcccccEEEEEEEEEEcccEEEEEEccc //