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Nocardia farcinica IFM 10152 (nfar0)
Gene : BAD55600.1
DDBJ      :             putative ATP-dependent protease
Swiss-Prot:             

Homologs  Archaea  5/68 : Bacteria  889/915 : Eukaryota  178/199 : Viruses  0/175   --->[See Alignment]
c.37.1
:347 amino acids
:PSIPRED
:DISOPRED
:BLT:PDB   32->317 1ksfX PDBj 3e-31 36.6 %
:RPS:PDB   40->199 2ce4B PDBj 1e-18 11.8 %
:RPS:PDB   181->346 1b94A PDBj 4e-14 11.0 %
:RPS:SCOP  30->338 1ksfX3  c.37.1.20 * 4e-22 32.1 %
:HMM:SCOP  17->317 1ksfX3 c.37.1.20 * 5.3e-47 28.4 %
:RPS:PFM   67->196 PF07724 * AAA_2 6e-15 42.5 %
:HMM:PFM   67->242 PF07724 * AAA_2 3.5e-35 35.3 153/171  
:HMM:PFM   249->328 PF10431 * ClpB_D2-small 4.5e-15 33.8 80/89  
:HMM:PFM   27->89 PF06309 * Torsin 0.00049 26.2 61/127  
:BLT:SWISS 1->342 ADPR_RHOER e-109 61.4 %
:SEG

SeqInfo AminoSeq See neighboring genes
Links GIB DAD Abbreviations Back to title page
GT:ID BAD55600.1 GT:GENE BAD55600.1 GT:PRODUCT putative ATP-dependent protease GT:DATABASE GIB00210CH01 GT:ORG nfar0 GB:ACCESSION GIB00210CH01 GB:LOCATION complement(814372..815415) GB:FROM 814372 GB:TO 815415 GB:DIRECTION - GB:PRODUCT putative ATP-dependent protease GB:PROTEIN_ID BAD55600.1 LENGTH 347 SQ:AASEQ MPYLTDMFHDQNGSRRPAPDPAPATGFDRQALAARLGSAILGQPAAVEAVVRAVTLAHVGAADPHRPRAAILLVGPTGVGKTELVRQTAAALRSGPDDLCRIDMNALAQEHYAASFTGAPPGYAGSKESLTLFDKATIEGDPYTPGLVLFDEIEKADATVIRALLHVLDTGELRLANGKERISFRNSFVFLTSNLGSAQVARRLRGGPLRRWRGTDRASTHAIVRRAVENFFDPEFFNRIDETIVLDPLDTDTAVRVAALEIDRLVARLGRRGVRLRCDATVAPALAACGFDPVYGARGLRRHLRVFLAEPVADAILCHRTPGSEVTLCARVVQGRVVVTAAGDVSG GT:EXON 1|1-347:0| BL:SWS:NREP 1 BL:SWS:REP 1->342|ADPR_RHOER|e-109|61.4|342/351| SEG 202->214|rrlrggplrrwrg| SEG 264->277|rlvarlgrrgvrlr| BL:PDB:NREP 1 BL:PDB:REP 32->317|1ksfX|3e-31|36.6|257/714| RP:PDB:NREP 2 RP:PDB:REP 40->199|2ce4B|1e-18|11.8|144/206| RP:PDB:REP 181->346|1b94A|4e-14|11.0|155/244| RP:PFM:NREP 1 RP:PFM:REP 67->196|PF07724|6e-15|42.5|113/160|AAA_2| HM:PFM:NREP 3 HM:PFM:REP 67->242|PF07724|3.5e-35|35.3|153/171|AAA_2| HM:PFM:REP 249->328|PF10431|4.5e-15|33.8|80/89|ClpB_D2-small| HM:PFM:REP 27->89|PF06309|0.00049|26.2|61/127|Torsin| GO:PFM:NREP 1 GO:PFM GO:0005524|"GO:ATP binding"|PF07724|IPR013093| RP:SCP:NREP 1 RP:SCP:REP 30->338|1ksfX3|4e-22|32.1|280/306|c.37.1.20| HM:SCP:REP 17->317|1ksfX3|5.3e-47|28.4|285/319|c.37.1.20|1/1|P-loop containing nucleoside triphosphate hydrolases| OP:NHOMO 2831 OP:NHOMOORG 1072 OP:PATTERN ----------------------------------1--------11--1-1------------------ 2372422233222222222-22222222222222223444243232222222323232224322236443222222222224322222432312222--2232224232222222222222222322222222222444452226234334442233333333333354563333333333333332222123222222222222222222222222233322223333332133333323333333332222333334333334433444543433333363333344333333333333333333333333533333333332243222222223222333222233321222222212211111112213332222422222233232222222322222222223-24224432232233332332222232222234323322233333333333322222222222222--11111111111112122-2223233324755356557776566888837634555322323323223322422232322322222222222233222222232232222111122131335398222112222222222222222222122223332433222322222232222222222331-22222------24233232333244443-3123223325343222223433336532433432333333332422222232-37777774777611222222222222363311112111111111133333332224288883444543443433111111111243433333334433223242244522222222333333111-11--331----1-11111111111111--1112223332233242 33--223-73212222122222222222212222222222222222222222222222222222222222222232211222122222-2721223222222134412732111--11111111311313B1-21211112111--11--11121-1111--1112-------214495t44454A7AD2794633223 ------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- DISOP:02AL 20-26, 343-347| PSIPRED ccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHccccHHHHHHHHHHHHHHHHHccccccccEEEEEEEccccccHHHHHHHHHHHHccccccEEEEEcccccccccHHHEEccccccccccHHHHHHHHHHHHHHHccccEEEEEcHHHccHHHHHHHHHHHHccEEEcccccEEcccccEEEEEEccccHHHHHHHHccccccccccccHHHHHHHHHHHHHccccccHHHHccEEEEEccccHHHHHHHHHHHHHHHHHHHHHcccEEEEcHHHHHHHHHHcccccccccHHHHHHHHHHHHHHHHHHHccccccccEEEEEEEcccEEEEEEcccccc //